| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3921 |
|---|
| Symbol | |
|---|
| ID | 8667211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4369444 |
|---|
| End bp | 4370778 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | multidrug efflux protein NorA |
|---|
| Protein accession | YP_003339580 |
|---|
| Protein GI | 271965384 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0451131 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.00764846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCAGG AGAGTCGGAA GCTCGCGGCG CTCGCCCTGC CCCTGGCCCT CACCCAGCTG
GCCCAGGTCG CGCTGACGAC CACCGACACG GTGATGATGG GTCTGCTCGG CACCGAGGCG
CTCGCCGCGG GCGGCCTGGC GATCGTGCTG TTCAACCAGC TCAGGACCAT GGGGGTCGGC
CTGGTGACGG GCCTGGGCAA CCAGGTGGCG GCGGCGTCCG CGCGCGGCGG CGAGCGGTCG
GAGCTCCGTG ACCTGGTGCG GGCGGGCATG GCGCTGGCCA CGCTCGCCGG TGTGGCGGGC
GCCCTGCTCA TGGTGGGCCT GGGGCATCTG CTCGCCTGGC TCGGCCAGGA CCCCCGGGTG
ATCGAGCTCG CCCGGCCGAT GCTGCTGGCC CTCGCGCCCG GCCTGGTGCC CTGCCTGTGG
TTCCAGGTGA TCCGCCAGTT CACCGTCGGG ATGCGGCGGC CCAAGGCGCT GGTGTGGATC
ACTGTGGTGT CCATCGCCGT GAACGCCGGC CTGAACTGGG TGCTCATCCA CCCGTTCGGC
CTCGCCGGGG TGGGCCTGGC GACCGCGCTG GTCTACCTGC TGTCCTTCCT GGCGCTCTAC
GCGATCACCC GGCGAGATCC CGTGCTCGCC CCGATGCTCG CGCTGGACGC CTGGCGCGTC
CGCCCGGACC GCCTGCGCGG GCTGGCCCGC CTCGGCGTGC CGATCGCGGC GACCTACGGT
TCGGAGGCCG GCTTCTTCTC GGTGGTCGCG CTGCTCATGG GCAGCTTCGG CGCCGCCGCG
CTCGCCGCGC ACACTGCGGT GAACCAGCTC GTCTACATCG TCTTCCAGGT GAGCGTCGGC
CTGTCCCACG CCGCCTCGAT CAGCGTCAGC GGCGAGGTCG CGGTCGCCGG GTACGGCTCC
GCCGCGCGGG TCGGCCGGAC CGCGCTCGTC CACGGCGCCC TGGTCGCGAC CGTGGTCGCC
GTCGTCTACC TCCTCCTGCC CGACGCGGTG CTGAGTCCCT TCCTCGACGC CGATCCCGCC
GCGCTCGCGG TGGCCGCGGA CCTGCTCGTG GTGGCCGCCG TGCTGCAGTA CTTCGACAGC
GCCCAGAACA TCGGTGTCGG CCTGCTCCGC GGTCTCGACG ACACCAGGTC CGGCTTCCGG
ATGACCTTGA TCGGCTACTG GGCCGTCGGC CTGCCGGCCG CCTGGCTGCT CGGCCACGTC
GCCGGAGCGG GGCCGGTCGG CGCCTGGGTG GGCCTGCTCG CCGGGCTGGC CGTCACCGCG
TTCCTGCTGC TGGTCCGTTT CCGCCGGACC CTCGGCGAGC GCGGCGGCGA GGCCGTGCGC
GGCGCGGCGC GCTGA
|
|---|
| Protein sequence | MFQESRKLAA LALPLALTQL AQVALTTTDT VMMGLLGTEA LAAGGLAIVL FNQLRTMGVG
LVTGLGNQVA AASARGGERS ELRDLVRAGM ALATLAGVAG ALLMVGLGHL LAWLGQDPRV
IELARPMLLA LAPGLVPCLW FQVIRQFTVG MRRPKALVWI TVVSIAVNAG LNWVLIHPFG
LAGVGLATAL VYLLSFLALY AITRRDPVLA PMLALDAWRV RPDRLRGLAR LGVPIAATYG
SEAGFFSVVA LLMGSFGAAA LAAHTAVNQL VYIVFQVSVG LSHAASISVS GEVAVAGYGS
AARVGRTALV HGALVATVVA VVYLLLPDAV LSPFLDADPA ALAVAADLLV VAAVLQYFDS
AQNIGVGLLR GLDDTRSGFR MTLIGYWAVG LPAAWLLGHV AGAGPVGAWV GLLAGLAVTA
FLLLVRFRRT LGERGGEAVR GAAR
|
|---|
| |