Gene Sros_3906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3906 
Symbol 
ID8667196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4351523 
End bp4353538 
Gene Length2016 bp 
Protein Length671 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339566 
Protein GI271965370 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.555541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.153375 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGCCGTC TGCGTAAGAA CCTGATCGCC GCCGCCGTGA TCGCCGTGAT CGTCGGGGTC 
AACCTGCCGG CCGTCGCCGG TTTCGCCTCC CGCCAGTGGC ACGACTACCG GATCAACCGG
GACGACTACA AGGCGCGCTA CGGCCACTGG AGCTTCCTGG ACGTCCCCGA CGAGTTCAAG
GTCAACGCCA TCCACGCGGC GCTGCTGCGC ACCGGCAAGG TGCTCATCGT CGCCGGCTCC
GGCAACAACG CCGCCAACTT CGACAAGGGC ACCTTCAAGA CCGTGCTCTG GGACCCGACC
AAGCCGGGGC AGGCGGGCGA GTTCAAGATG ATCGACACGC CCGTCGACTT CTTCTGCGCC
GGACACGTGC TGCTGCCGAA CGGCAACCTC CTCATCGCCG GTGGCACGCT CCGCTTCGAG
GTGCTCAAGA GCAAGGTGAA GAGGGCCGGA GGGGCCCTGG TGGTGAAGAA CGAGAGCCCG
CACATCAGGA GGCAGCTCCA CCCCGGCACC CTGATCGCGG CCCCCAGCGG GAGGCTCTAC
CGCACCACCG CGCACATCAC GGTGCCCCCC GCCGAGAAGA TCGAGAGCGG CGTGCCGGGC
AAGGCCCGGA TCAAGCCCAG CGAGACCAAG GTCTTCGCCG AGTCCGTGGT CGAGGGCGTC
CCCGGCGTCT TCACCTCGCC CGGCGGCTAC GTCAAGTACG AGATCCAGGG GCTGACCGGC
AGGGAGAAGC GGAACCTGTA CGCCATGGGC GCCGACATGA CGCTTGAGAA GCAGGACTTC
CAGGGCATCA AGGACGCCTA CGAGTTCGAT CCGATCGCCG AGCGCTACAT CAAGGTCCAG
GACATGGCCG AGGGGCGCTG GTACCCGACG ATGACCGCCC TGCCCGACGG CAAGGTGATG
ACGGTCTCCG GCCTGGACAC CGTGGGACAG ATCACCAGGG ACAACGAGTT CTACGACCCG
CAGACCAGAA GCTGGATCCC GGGGCCCAAG CGGTTCTTCC CCAGCTACCC GGCGCTGTTC
CTGCTGGACG ACGACACCCT GTTCTTCTCC GGCATGAGCG CCGGATACGG CCCGGGGCAG
CTCGCGCTCC GTCCCCCCGG CATCTGGGAC TACCGCCGCG ACACCGACCG CCTGATCAAG
TCCGCCGGCG GCGTCGGCGG CGTGGCGCCC GACGAGATGG AGGCCTTCAC CCCGGTCCCC
GGGCTGCCCG AGCCGGAGCT CAACGAGACC GGCGCCTCGG TGCTGCTGCC CCCAGCGCAG
GACCAGCGGA TCATGGTGAT GGGCGGCGGG CCGGTCGGGG AGCGCCAGCC GGGCCTGCCC
AACGCCACCG CCCGGACCGC CATCATCGAC CTCAAGCAGC CCGAGCCCCG CTACGTCCGC
GGCCCGAACC TCTCCGACCC GGTGCGCTAC CCGTCGGCGG TGCTGCTCCC CGACGACACC
GTGTTCTCCT TCAACGGCTC CAGCGACTAC CGCGGAAGGG GCGAAAGCGA CATCCTGCGG
GCCGAGGTCT ACCGCCCCAA GAGCAACAGC TTCCACGAGG CCGCAGCGCC CGCGGTGGGC
CGCAACTACC ACGCCGAGGG CCTGCTGCTG CCCGACGGCC GGGTGCTCAG CATGGGCTCC
GACCCGCTCT TCGCCGACGA GGCGGGCACG GTGCCCGGCT CGTTCGACCA GCGGATCGAG
ATCTACACCC CGCCCTACCT GCACAACGGC GAGAAGCGGC CGATGATCAC CGATGGGCGG
CGGATGCTCC GGATGGGCTC CCGGGCGGGG TTCAAGACCC CCGACGCCGA GCGCATCCAG
GAGGTCCGGC TGATGCGGCC GAGCGCGGTC ACCCATGTCA CGGACGTGGA ACAGCGCTCC
ATCAAGCTCG ACTTCACCCG GGTGCCCACC GGCATCGTCG TCACGGTCCC GACCAACCCC
GCCCTGGCTC CGCCCGGCTG GTACATGCTG TTCGGAGTCA CCGCGAAGGG GACCCCGTCC
CCGGCCCGCT GGGTCCACCT CGGAGGAGAT CGATGA
 
Protein sequence
MSRLRKNLIA AAVIAVIVGV NLPAVAGFAS RQWHDYRINR DDYKARYGHW SFLDVPDEFK 
VNAIHAALLR TGKVLIVAGS GNNAANFDKG TFKTVLWDPT KPGQAGEFKM IDTPVDFFCA
GHVLLPNGNL LIAGGTLRFE VLKSKVKRAG GALVVKNESP HIRRQLHPGT LIAAPSGRLY
RTTAHITVPP AEKIESGVPG KARIKPSETK VFAESVVEGV PGVFTSPGGY VKYEIQGLTG
REKRNLYAMG ADMTLEKQDF QGIKDAYEFD PIAERYIKVQ DMAEGRWYPT MTALPDGKVM
TVSGLDTVGQ ITRDNEFYDP QTRSWIPGPK RFFPSYPALF LLDDDTLFFS GMSAGYGPGQ
LALRPPGIWD YRRDTDRLIK SAGGVGGVAP DEMEAFTPVP GLPEPELNET GASVLLPPAQ
DQRIMVMGGG PVGERQPGLP NATARTAIID LKQPEPRYVR GPNLSDPVRY PSAVLLPDDT
VFSFNGSSDY RGRGESDILR AEVYRPKSNS FHEAAAPAVG RNYHAEGLLL PDGRVLSMGS
DPLFADEAGT VPGSFDQRIE IYTPPYLHNG EKRPMITDGR RMLRMGSRAG FKTPDAERIQ
EVRLMRPSAV THVTDVEQRS IKLDFTRVPT GIVVTVPTNP ALAPPGWYML FGVTAKGTPS
PARWVHLGGD R