Gene Sros_3884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3884 
Symbol 
ID8667174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4324627 
End bp4325802 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content75% 
IMG OID 
ProductATPase 
Protein accessionYP_003339544 
Protein GI271965348 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000147668 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATGA CCGACGACCA GGTGACGGTC CCTCCGGCCC GGCAGGTGCT CGCGGCCGAG 
GAACGGTACG CCACCGAACT CGCCTTCCTG GCCGCCCACG ACGCCGGGCC CCGCCCGCCG
GGCTGGGCGC TGACGCCACG CGCGGTGGTG ACCTTCGTCT GCGGCAGCGG CGACGAGACG
CTGGAACTGC CGAAGAACCG CCGCGGGACG GCCGGCGGCG CTCCGGACCG GCTGAGGGTG
GCCGCCAAGT TCGTCGGCGA ACGCGCCCTG GTCGAACGGT GCGTGGTGAC CCTCGCGGGG
GAGCGGGGCC TGCTGCTGGT CGGCGAGCCC GGCACCGCCA AGTCGATGCT GTCGGAGCTG
CTGGCCGCCG CCGTGTGCGG AACCAGCGCG CTCACCGTGC AGGGCACCGC CGGGACGACC
GAGGACGCCT TCCGCTACGG CTGGAACTAC GCCCTGCTGC TCGCCCAGGG CCCGAGCCGG
GACGCGCTGG TCGACTCCCC GGTGCTCACG GCCATGCGCG CGGGGCGCGT CGCCCGGGTC
GAGGAGATCA CCCGCTGCCT GCCCGAGGTG CAGGACGCCC TGGTGTCGAT CCTGTCCGAC
AGGCGGCTCA GCGTGCCGGA GCTCGCCGGT ACCGCCGACG CCCAGGTGGC GGCCACCCCC
GGCTTCAGCG TGATCGCCAC GGCCAACCTG CGCGACCGCG GCGTCTCGGA GATGTCGGCC
GCGCTGAAGC GACGGTTCAA CTTCGAGACC GTCGACCCCA TCGCGGACGC CGAGGCGGAG
ACCTCCCTGG TGCGCCGCCA GGCCACCTCG GTCGTGCAGC GGGCGGGTGC CGCCTTCGGC
GTGGACGACG CTGTGCTCGA CGCGCTGGTC ACGGTCTTCC GCGACCTGCG CTCCGGCCGC
TCGGACGAGG GCTGGGACGT GGAGCGGCCC GGCACGGTGA TGTCCACCGC CGAGGCGGTG
CAGGTCGCCG CCTCACTGGG GGTCGCCGCG GCCTACCTGC CGGACGGCGA TGTCCTCGAC
CTGCTGCCGG GACACCTGCT CGGCGTCGTC CGCAAGGACG ACCCCGCCGA CCACGGGCGG
CTGCTCGGCT ACTGGGACGG CCCGGTGCGA CGTCGCGCCG AGGACGGCTC CGCGATGTGG
CGCCGGCTCT GGGACCTGCG GGAGAACCTC CGTTGA
 
Protein sequence
MTMTDDQVTV PPARQVLAAE ERYATELAFL AAHDAGPRPP GWALTPRAVV TFVCGSGDET 
LELPKNRRGT AGGAPDRLRV AAKFVGERAL VERCVVTLAG ERGLLLVGEP GTAKSMLSEL
LAAAVCGTSA LTVQGTAGTT EDAFRYGWNY ALLLAQGPSR DALVDSPVLT AMRAGRVARV
EEITRCLPEV QDALVSILSD RRLSVPELAG TADAQVAATP GFSVIATANL RDRGVSEMSA
ALKRRFNFET VDPIADAEAE TSLVRRQATS VVQRAGAAFG VDDAVLDALV TVFRDLRSGR
SDEGWDVERP GTVMSTAEAV QVAASLGVAA AYLPDGDVLD LLPGHLLGVV RKDDPADHGR
LLGYWDGPVR RRAEDGSAMW RRLWDLRENL R