| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3869 |
|---|
| Symbol | |
|---|
| ID | 8667159 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4306338 |
|---|
| End bp | 4307960 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | signal transduction histidine kinase regulating citrate/malate metabolism |
|---|
| Protein accession | YP_003339529 |
|---|
| Protein GI | 271965333 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0780654 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0130314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCAAG TCACCATTGC GTACATTTTG GTCGTGGACA TGAGGACGCT GCCGGGGCGG
ATGCGCCGCT GGAGCCTGGC CCGGCAGATG CTGGCCTTGC AGATCGCCGT CGTCGGGGTC
ACCGTGACGG GAGGCGCGGC GCTGGCCTTC CTCCAGGCCC GCGACCTGCT CGTGGAGGAG
GCGGCGGGGA AGTCCAGGGC GGTGACCGTC AGCGTGGCCG ACTCCCCCTC GGTCCTGGCC
TCCCTCGGCG ACTCCGTCGC GCTCCAGCCG TACGCCGAAC GGGTCCGGCG GGAGACCGGG
GTGGACTTCG TCACGATCAT GAGCACCGGC GGGCTCCGCT ACACCCATCC CAACCCGGCC
CAGATCGGCC GCCGGTTCCT GGGCACCACC GCGCCCGCCC TGGAGGGCCG GACCTTCACC
GAGACCTACA CCGGAACCCT CGGCTCCTCG GTGCGCGCCG TCGCCCCGGT GCGCGACGCC
GCCGGGAGGG TGCGGGCCCT GGTCAGCGCG GGCATCACGG TCGAGAGGAT CGGCGTCAGG
CTCCGCGGGC AGATCACCGG CGCGGTGGTC ATCGGCCTGC TCGGCCTGTC CACCGGCGGC
GCGGGCACCT ATCTGGTCGG CAGCCGGCTG CGCCGCCAGA CCCGCGGGAT GGGCCCCGCC
GAGCTCAGCC GGATGTACGA GTACCACGAC GCGATCCTGC ACGCCGTACG GGAGGGGCTG
CTGCTGGTCG ACGACGCGGG CAGGCTGACG CTGTGCAACG ACGGCGCCCG GGAGCTCCTC
GGCCTGCGCG GCGAGGCGGA CGGGCAGCAC GTCACCGAGC TGGGCCTGCC CTCCTCCCTC
ACCGGGCTGC TGGTCGCCGG GGAGAACCGG AGCGACGAGA TCCACCTGAC CGGAGAGCGG
ACACTCGTGG TGAACGTCGC GGTGGTCCGC TCCGGCAACC GCTCGCTCGG CACGGTGGTC
ACCCTGCGCG ACCACACCGA GCTGCAGTCC CTGACCGGGC AGCTCGACGC CGAGCGCGGC
TTCGCCGACT CCCTGCGCGC CGCCGCGCAC GAGTCGGCCA ACCGGCTGCA CACCGTCATC
ACCCTGGTCG AGCTGGGCCG CGCCGAGCAG GCGGTGGCCT TCGCGACCGC CGAGCTGAGG
GCGGCGCAGG AGCTCACCGA CCGGGTGGTG GGCGCGGTGC GCGAGCCGGT GCTCGCGGCG
CTGCTGCTGG GCAAGAGCGC CGAGGCGGCC GAGCGCGGCG TGGAGCTGGC GATCAGCCCG
GACACCGAGC TCGACGACAT CGGCCTGGAC GGCCGGGATC TGGTGACGAT CCTCGGCAAT
CTGATAGACA ACGCGGTCGA GGCGGCCGTG TCGGGCGTCC CGCCCGCGCG GGTGGACGTC
CGCCTGCGCG CCGACGGGAC GACCTTCCTG CTCGGCGTGT CCGACAGCGG CCCGGGGATG
GACGCCGCCA CCGCGCGGGA GGCCTTCCGG CGGGGCTGGA CCACCAAGGG CGACGGCCGC
GGGCTCGGGC TGGCCATGGT GGGTCAGGCG GTGCGCCGCC TGGGCGGCAC GATCGACGTC
GGCGGCGGCC GGGGAGCGGT GTTCACCGTA CGGCTGCCGC TGCGAGGGAG GGATGTTCCG
TGA
|
|---|
| Protein sequence | MTQVTIAYIL VVDMRTLPGR MRRWSLARQM LALQIAVVGV TVTGGAALAF LQARDLLVEE
AAGKSRAVTV SVADSPSVLA SLGDSVALQP YAERVRRETG VDFVTIMSTG GLRYTHPNPA
QIGRRFLGTT APALEGRTFT ETYTGTLGSS VRAVAPVRDA AGRVRALVSA GITVERIGVR
LRGQITGAVV IGLLGLSTGG AGTYLVGSRL RRQTRGMGPA ELSRMYEYHD AILHAVREGL
LLVDDAGRLT LCNDGARELL GLRGEADGQH VTELGLPSSL TGLLVAGENR SDEIHLTGER
TLVVNVAVVR SGNRSLGTVV TLRDHTELQS LTGQLDAERG FADSLRAAAH ESANRLHTVI
TLVELGRAEQ AVAFATAELR AAQELTDRVV GAVREPVLAA LLLGKSAEAA ERGVELAISP
DTELDDIGLD GRDLVTILGN LIDNAVEAAV SGVPPARVDV RLRADGTTFL LGVSDSGPGM
DAATAREAFR RGWTTKGDGR GLGLAMVGQA VRRLGGTIDV GGGRGAVFTV RLPLRGRDVP
|
|---|
| |