Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3868 |
Symbol | |
ID | 8667158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4305670 |
End bp | 4306341 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | putative response regulator ofcitrate/malate metabolism |
Protein accession | YP_003339528 |
Protein GI | 271965332 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0941559 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.017891 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGATCTCGG TGCTGGTCGT CGAGGACGAG GAGATCACCG CCGAGGCGAA CCGCCTCTAC GTGGAACGGG TGCCCGGTTT CCGGGTGGAG GGGGTGGCCA GGTCCGGCGG GGAGGCGCTG CGTTTCGTAC GGCGCCGCCC GGTGGACCTG ATCCTGCTCG ACCTCTACCT GCCCGACATG CACGGGCTGG AGGTGTGCCG GGCCCTGCGG GCGGCGGGCG TCCTGTCCGG CGTCATCGCG GTCACCTCGG CGCGCGACCT GTCGGTGGTC CGGTCCGCGG TCTCCGTCGG CGTGGCGCAG TACCTGCTCA AGCCCTTCAC GTTCGCCTCG CTCAGCGAGA GGCTCACGCG CTACGCGGAG TTCCGGTCGT CGGTGGAGGG ATCGGGCGAG GTCGGCGGCC AGAACGAGGT GGACCGCGCG CTGGCCGCCC TGCGGGGCCC GGGGCACAGC CCGCTGCCGA AGGGGATGGC CCCGGTCACC CTCGACGCCG TGCTGGCGGA GCTGCGCAAG GCCCCCGCGG GCGTGTCGGC GCAGGCGGCC GGCACCGCGA TCGGCATCTC GCGGGTGACC GCCCGCCGCT ACCTGGAACA CCTGACGGAC AGCGGCGTCG CGTGCCGGGT CCCGCAGTAC GGCGGGGTCG GGCGGCCCGA GCTGCTCTAT CGAATCGTTT GA
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Protein sequence | MISVLVVEDE EITAEANRLY VERVPGFRVE GVARSGGEAL RFVRRRPVDL ILLDLYLPDM HGLEVCRALR AAGVLSGVIA VTSARDLSVV RSAVSVGVAQ YLLKPFTFAS LSERLTRYAE FRSSVEGSGE VGGQNEVDRA LAALRGPGHS PLPKGMAPVT LDAVLAELRK APAGVSAQAA GTAIGISRVT ARRYLEHLTD SGVACRVPQY GGVGRPELLY RIV
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