Gene Sros_3868 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3868 
Symbol 
ID8667158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4305670 
End bp4306341 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content74% 
IMG OID 
Productputative response regulator ofcitrate/malate metabolism 
Protein accessionYP_003339528 
Protein GI271965332 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0941559 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.017891 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCTCGG TGCTGGTCGT CGAGGACGAG GAGATCACCG CCGAGGCGAA CCGCCTCTAC 
GTGGAACGGG TGCCCGGTTT CCGGGTGGAG GGGGTGGCCA GGTCCGGCGG GGAGGCGCTG
CGTTTCGTAC GGCGCCGCCC GGTGGACCTG ATCCTGCTCG ACCTCTACCT GCCCGACATG
CACGGGCTGG AGGTGTGCCG GGCCCTGCGG GCGGCGGGCG TCCTGTCCGG CGTCATCGCG
GTCACCTCGG CGCGCGACCT GTCGGTGGTC CGGTCCGCGG TCTCCGTCGG CGTGGCGCAG
TACCTGCTCA AGCCCTTCAC GTTCGCCTCG CTCAGCGAGA GGCTCACGCG CTACGCGGAG
TTCCGGTCGT CGGTGGAGGG ATCGGGCGAG GTCGGCGGCC AGAACGAGGT GGACCGCGCG
CTGGCCGCCC TGCGGGGCCC GGGGCACAGC CCGCTGCCGA AGGGGATGGC CCCGGTCACC
CTCGACGCCG TGCTGGCGGA GCTGCGCAAG GCCCCCGCGG GCGTGTCGGC GCAGGCGGCC
GGCACCGCGA TCGGCATCTC GCGGGTGACC GCCCGCCGCT ACCTGGAACA CCTGACGGAC
AGCGGCGTCG CGTGCCGGGT CCCGCAGTAC GGCGGGGTCG GGCGGCCCGA GCTGCTCTAT
CGAATCGTTT GA
 
Protein sequence
MISVLVVEDE EITAEANRLY VERVPGFRVE GVARSGGEAL RFVRRRPVDL ILLDLYLPDM 
HGLEVCRALR AAGVLSGVIA VTSARDLSVV RSAVSVGVAQ YLLKPFTFAS LSERLTRYAE
FRSSVEGSGE VGGQNEVDRA LAALRGPGHS PLPKGMAPVT LDAVLAELRK APAGVSAQAA
GTAIGISRVT ARRYLEHLTD SGVACRVPQY GGVGRPELLY RIV