| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3854 |
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| Symbol | |
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| ID | 8667144 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Streptosporangium roseum DSM 43021 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013595 |
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| Strand | + |
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| Start bp | 4291582 |
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| End bp | 4293222 |
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| Gene Length | 1641 bp |
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| Protein Length | 546 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | choline dehydrogenase |
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| Protein accession | YP_003339515 |
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| Protein GI | 271965319 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.131347 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00687272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACGACT TCGTCATCGT TGGGGGCGGA TCGGCCGGAA GCGCTCTGGC GAACCGGTTG
TCCGCCGACC CCGCCAACCG GGTGCTGGTG CTGGAGGCCG GCCGCCCGGA CTACCCCTGG
GACGTCTTCA TCCACATGCC CGCCGCGCTG ACCTTCCCCA TCGGCAGCCG GTTCTACGAC
TGGAAGTACG AGTCCGAGCC CGAGCCGCAC ATGAACGGCC GCCGGATCTA CCACGCCCGC
GGCAAGGTCC TGGGCGGTTC CAGCAGCATC AACGGCATGA TCTTCCAGCG GGGCAATCCC
CTGGACTACG AGCGCTGGGC CGCCGACCCG GGCATGGAGA CCTGGGACTT CGCCCACTGC
CTGCCCTATT TCAAGCGGAT GGAGAACTGC CTCGCCGCGG ACCCGGACGA TCCCCTGCGA
GGACACGACG GGCCTCTGGT GCTTGAGCGC GGGCCGGTGC GCAACCCGCT GTTCGCGGCG
TTCTTCGAGG CGGCGCAGCA GGCCGGCTAC CCGCTGACCG ACGACGTCAA CGGATACCGC
CAGGAGGGCT TCGCCCGTTT CGACCGCACC ATCCGCCGGG GGCGCCGGCT CTCCGCCGCG
CGGGCCTACC TGCATCCCGT CAGGAGACGC CCCAACCTGG AGATCAGGAC CCGGGCGTTC
GTCACGAGGA TCCTCTTCGA GGGGGGACGC GCCGTCGGCG TCGAGTACAA CGGCCGGACG
GTCCGCGCGG GCGAGGTCGT CCTCTGCGGC GGCGCGATCA ACTCCCCGCA GCTGCTCCAG
CTCTCCGGTG TGGGCGACGC CGCCGAACTG GGCGCCCTCG GCGTCGACGT CGTGCACGAC
CTGCCGGGGG TGGGGGAGAA CCTGCAGGAC CATCTGGAGG TCTACATCCA GTACGGCTGC
AGGCGGCCGG TGTCGATGCA GCCCGCGATG AAGTGGCGCA ACCGGCCGTG GATAGGCGCG
CAATGGCTGT TCCTGCGCAG CGGGCCCGGA GCGACCAACC ACTTCGAGGC GGGCGGTTTC
GTTCGCGGCA ACGACGACGT CGACTACCCC AACCTGATGT TCCACTTCCT GCCCGTCGCC
GTCCGCTACG ACGGGTCCGC GCCCGTCGGC GGGCACGGCT ACCAGGTGCA CATCGGGCCG
ATGTACTCCG ACGCGCGCGG CTCGGTGAAG ATCAGGAGCA CCGATCCCCG GGTCCATCCG
GCGCTGCGGT TCAACTACCT GTCCACCGCG CGGGACCGGC GGGAGTGGGT GGAGGCGGTC
CGGGTCGCCC GCGACGTCCT GACCCAGCGG GCGATGGACG AGTTCAACGC GGGGGAGCTG
TCGCCCGGAC CGGAGGTCCG GACCGACCAG GAGATCCTGG ACTGGGTGGC CAAGGACGGC
GAGACCGCGC TGCACCCCTC CTGCACCGCC CGGATGGGCG TCGACGACCT CGCCGTCGTC
GATCCCCTCT CCATGAGGGT CCACGGCCTC GACGGGCTCC GCGTCGTGGA CGCCTCGGTC
ATGCCGTACG TGACCAACGG CAACATCTAC GCGCCGGTCA TGATGGTCGC GGAGAAGGCG
GCGGACCTCA TCCTGGGCGA CACGCCGATG GCGGCCGAAC CCGCCGGCTT CTACCGGCAC
CGCGGGGGCG CGGACGGCTG A
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| Protein sequence | MYDFVIVGGG SAGSALANRL SADPANRVLV LEAGRPDYPW DVFIHMPAAL TFPIGSRFYD
WKYESEPEPH MNGRRIYHAR GKVLGGSSSI NGMIFQRGNP LDYERWAADP GMETWDFAHC
LPYFKRMENC LAADPDDPLR GHDGPLVLER GPVRNPLFAA FFEAAQQAGY PLTDDVNGYR
QEGFARFDRT IRRGRRLSAA RAYLHPVRRR PNLEIRTRAF VTRILFEGGR AVGVEYNGRT
VRAGEVVLCG GAINSPQLLQ LSGVGDAAEL GALGVDVVHD LPGVGENLQD HLEVYIQYGC
RRPVSMQPAM KWRNRPWIGA QWLFLRSGPG ATNHFEAGGF VRGNDDVDYP NLMFHFLPVA
VRYDGSAPVG GHGYQVHIGP MYSDARGSVK IRSTDPRVHP ALRFNYLSTA RDRREWVEAV
RVARDVLTQR AMDEFNAGEL SPGPEVRTDQ EILDWVAKDG ETALHPSCTA RMGVDDLAVV
DPLSMRVHGL DGLRVVDASV MPYVTNGNIY APVMMVAEKA ADLILGDTPM AAEPAGFYRH
RGGADG
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