Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3853 |
Symbol | |
ID | 8667143 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | - |
Start bp | 4290657 |
End bp | 4291448 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | IclR family transcriptional regulator |
Protein accession | YP_003339514 |
Protein GI | 271965318 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.532852 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.00959131 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGGCAACG ATTCCTCCAG CCACCGGGCT GACGGCACCG GCGGGGTGCA GTCGGTCGAC CGGGCCATCA GCATCCTGGA GATCCTTTCC CAGCGTCAGG AGGCCGGTGT CAGCGAGGTC GCCGTGGAGA TCGGCGTCCA CAAGTCGACC GCCTTCCGGC TGCTCGGCGC GCTGGAGTCC CGGGGGCTGG TCGAGCAGGC CGAGGACCGG GGGAAATACC GGCTCAGCTT CGGAATGGTC CGCCTCGCGG GCGGCGTGGC CGCCCGGCTG GACCTCACCC AGCAGAGCCG CCCCGTATGC CGGCGGCTGG CCGAGGAGAT CGGCGAGACG GTCAACATCG CCGTCCTGCG CTCCCACTAC GCGGTGAACC TGGACCAGGT GCGCGGGCCG GCGGCGGTCA CCACCCAGAA CTGGGTCGGC CAGCTCACCC CGCTGCACGC TACGTCGAGC GGGAAGGTGC TGCTGGCCCA CCTCGACGCC CGCCACCGGG CGCGGCTGCT CGACGCCGCC GGCTTCGAGC GCTACACCCC CGGCACGATC ACCTCGGTCC CCGCTCTCGA AGAGCAGCTG GACGAGGCCC GGCGCAGGGG CTACGCGGTC ACCCTGGAGG AGTACGAGAT CGGGCTGAAC GCCGTCGCGG CCCCCATCCG CTCCCACGAC GGCGAGGTCG TCGCCGCGGT CAGCGCCTCG GGTCCGGCCT ACCGCCTCGG CGAGGAGCGG CTGCACGACC TCGCCCCGGT CCTCGTCGCC GGGGCGCGGG ACATCAGCCA CCGCCTGGGG CACACCGGCT GA
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Protein sequence | MGNDSSSHRA DGTGGVQSVD RAISILEILS QRQEAGVSEV AVEIGVHKST AFRLLGALES RGLVEQAEDR GKYRLSFGMV RLAGGVAARL DLTQQSRPVC RRLAEEIGET VNIAVLRSHY AVNLDQVRGP AAVTTQNWVG QLTPLHATSS GKVLLAHLDA RHRARLLDAA GFERYTPGTI TSVPALEEQL DEARRRGYAV TLEEYEIGLN AVAAPIRSHD GEVVAAVSAS GPAYRLGEER LHDLAPVLVA GARDISHRLG HTG
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