Gene Sros_3853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3853 
Symbol 
ID8667143 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4290657 
End bp4291448 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content73% 
IMG OID 
ProductIclR family transcriptional regulator 
Protein accessionYP_003339514 
Protein GI271965318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.532852 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00959131 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCAACG ATTCCTCCAG CCACCGGGCT GACGGCACCG GCGGGGTGCA GTCGGTCGAC 
CGGGCCATCA GCATCCTGGA GATCCTTTCC CAGCGTCAGG AGGCCGGTGT CAGCGAGGTC
GCCGTGGAGA TCGGCGTCCA CAAGTCGACC GCCTTCCGGC TGCTCGGCGC GCTGGAGTCC
CGGGGGCTGG TCGAGCAGGC CGAGGACCGG GGGAAATACC GGCTCAGCTT CGGAATGGTC
CGCCTCGCGG GCGGCGTGGC CGCCCGGCTG GACCTCACCC AGCAGAGCCG CCCCGTATGC
CGGCGGCTGG CCGAGGAGAT CGGCGAGACG GTCAACATCG CCGTCCTGCG CTCCCACTAC
GCGGTGAACC TGGACCAGGT GCGCGGGCCG GCGGCGGTCA CCACCCAGAA CTGGGTCGGC
CAGCTCACCC CGCTGCACGC TACGTCGAGC GGGAAGGTGC TGCTGGCCCA CCTCGACGCC
CGCCACCGGG CGCGGCTGCT CGACGCCGCC GGCTTCGAGC GCTACACCCC CGGCACGATC
ACCTCGGTCC CCGCTCTCGA AGAGCAGCTG GACGAGGCCC GGCGCAGGGG CTACGCGGTC
ACCCTGGAGG AGTACGAGAT CGGGCTGAAC GCCGTCGCGG CCCCCATCCG CTCCCACGAC
GGCGAGGTCG TCGCCGCGGT CAGCGCCTCG GGTCCGGCCT ACCGCCTCGG CGAGGAGCGG
CTGCACGACC TCGCCCCGGT CCTCGTCGCC GGGGCGCGGG ACATCAGCCA CCGCCTGGGG
CACACCGGCT GA
 
Protein sequence
MGNDSSSHRA DGTGGVQSVD RAISILEILS QRQEAGVSEV AVEIGVHKST AFRLLGALES 
RGLVEQAEDR GKYRLSFGMV RLAGGVAARL DLTQQSRPVC RRLAEEIGET VNIAVLRSHY
AVNLDQVRGP AAVTTQNWVG QLTPLHATSS GKVLLAHLDA RHRARLLDAA GFERYTPGTI
TSVPALEEQL DEARRRGYAV TLEEYEIGLN AVAAPIRSHD GEVVAAVSAS GPAYRLGEER
LHDLAPVLVA GARDISHRLG HTG