| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3833 |
|---|
| Symbol | |
|---|
| ID | 8667123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4272341 |
|---|
| End bp | 4273756 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | hydroxyneurosporene dehydrogenase |
|---|
| Protein accession | YP_003339495 |
|---|
| Protein GI | 271965299 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.0251377 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCGGCG GCGGCGTGGG CGGCATGGTC TCCGCCCTGC TGCTGGCCGG GCAGGGGCAT
CGGGTGCGGC TGTACGAGCA GCGGTCCCGG CTGGGGGGCA AGCTCGCCGA GCACGCGCGC
GACGGCTTCA CCTTCTCCGT CGGGCCGTCG CTGCTGACCC TGCCCGGCGT CTTCGCCGAC
CTCGGCCTGG AGCTCGACCT CGTCGAGCCG CGGGAGCTGT GCCGCTACCG CTTCGCCGAC
GGCTCGGCGC TGACGGCGTA CCGCGACCCG GCGAGGACGG CCGCCGAGGT GGACCGGCTC
TCGCCGGGAG AGGGCCGCAA CTGGCTGGCC TTTCACGAGT GGGCGCGGAC CTGCTTCGAG
GCGTCGCGTC ACACGTTCTT CGCCGGGCCG CTCACCCGGC CGCCGGCGCG GGCACGCCTG
TCCGACCTGA TGGCGGTCGC GCCCGGCCGG ACCCTCGACG GCCTGGCCCG CCGCTTCTTC
ACCGATCCGC GCCTGCTCCA GTACGCCGGC CGTTACGCGA CCTACGCGGG CTCCAGCCCC
TACCGGGCCC CGGCGGCTCT GGCCTGCATC CCCGCGATCG AGCACGGGCA GGGCGGCTGG
TACGTGCCCG GCGGGCTGCC CCGCGTCGCC GACGCCCTGG CCCTGCTGCT GGACAAGACG
GGGGTGGAGG TCGCCCTCGG CGCCGAGGTG ACGGACGTGC TCGCCGACGG CCGCCGGGTC
CGGGGCGTAC GGCTGGCCTC CGGGCAGCGC GAACGCGCCG ACGTCGTGAT CGCCAACACC
GACGCGGCGG CGCTGTACGG GCGGCTGCTG CCGGATCGGC GGCGGCTGCG GCGCATCGCC
GCGCTCGGCA CCTCCTCCTC GGCGTTCCTG CTGCTGGCCG GGGTGGAGGG GCGGACCGAG
GGACTGGCGC ACCACTCCGT CGTCTTCTCC GCCGACTACG GACGGGAGTT CGCCGACATC
TTCGACCGCC GCCGGCCGCC GGAGGATCCG ACCGTCTACA TCGGCTGCTC GGCGGTGGAC
GACCCGTCAC AGGCTCCGGA GGGCGCCGAG AACTGGGTCA TGCTGGTCAA CGTCCCGGCC
CGCGACCCGG GTCGGTGGCC GATGTCCCCC GAGGCCTACC GGGACCTGGT GCTGGACCGC
CTGGCCGCGC GGGGTCACGA CCTGTCGGGG CGGCTCCGCT TCGTCGATCT GCTGACCCCC
GCCGACCTGC GCGAGCGGTA CGGCGCGTGG GGCGGGGCGA TCTACGGTGG CGCCTACGCC
GGCCCGCTCG CCCCCTTCCG GCGCCCCGGA AACAGGGGTC CCCGGCGCGG CCTGTACCTG
GTGGGAGGCT CGGTCCACCC CGGCGGCGGG CTGCCGCTGG TCGCGATGGG CGGCCGCATC
GTCGCCTCGC TCGTCCAGGA GGACCTGCGG CGATGA
|
|---|
| Protein sequence | MIGGGVGGMV SALLLAGQGH RVRLYEQRSR LGGKLAEHAR DGFTFSVGPS LLTLPGVFAD
LGLELDLVEP RELCRYRFAD GSALTAYRDP ARTAAEVDRL SPGEGRNWLA FHEWARTCFE
ASRHTFFAGP LTRPPARARL SDLMAVAPGR TLDGLARRFF TDPRLLQYAG RYATYAGSSP
YRAPAALACI PAIEHGQGGW YVPGGLPRVA DALALLLDKT GVEVALGAEV TDVLADGRRV
RGVRLASGQR ERADVVIANT DAAALYGRLL PDRRRLRRIA ALGTSSSAFL LLAGVEGRTE
GLAHHSVVFS ADYGREFADI FDRRRPPEDP TVYIGCSAVD DPSQAPEGAE NWVMLVNVPA
RDPGRWPMSP EAYRDLVLDR LAARGHDLSG RLRFVDLLTP ADLRERYGAW GGAIYGGAYA
GPLAPFRRPG NRGPRRGLYL VGGSVHPGGG LPLVAMGGRI VASLVQEDLR R
|
|---|
| |