Gene Sros_3796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3796 
Symbol 
ID8667086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4231972 
End bp4232364 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content62% 
IMG OID 
Producttransposase IS200 
Protein accessionYP_003339459 
Protein GI271965263 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.704224 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.354016 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCTCC GGACGAACAG CAACATCGCC TTCCAGTGCG CGTTCCACGT GGTGTGGTGC 
CCCGGGTACC GGCGGCGGGT TCTGGGCGGA CGGATCGAAG AACGGCTTAA ACAGTTGATT
CGTGAGGTGA TCGAAGAGAA GGGGGCGTGG CTGGTGGAAC TCGAAGTCAT GCCCGACCAC
GTTCACCTAC TGGTCGAGGT GGACCCCCAA CTCGGGATCC ACACGTTGGT CAAGGCCATC
AAAGGCCGTA CTTCTCGCCT GCTCCGCGAG GAATTCCCGG CGCTGAAGTC GAAGCTGCCG
ACCTTGTGGA CGAACTCCTC CTCCGTAGCG ACCGTGGGTG GTGCGCCCCT GGACGTGGTC
AAGCGCTACG TCGAGAAGCA GAAGAACCGG TGA
 
Protein sequence
MTLRTNSNIA FQCAFHVVWC PGYRRRVLGG RIEERLKQLI REVIEEKGAW LVELEVMPDH 
VHLLVEVDPQ LGIHTLVKAI KGRTSRLLRE EFPALKSKLP TLWTNSSSVA TVGGAPLDVV
KRYVEKQKNR