| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3791 |
|---|
| Symbol | |
|---|
| ID | 8667081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 4222349 |
|---|
| End bp | 4225417 |
|---|
| Gene Length | 3069 bp |
|---|
| Protein Length | 1022 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, SARP family |
|---|
| Protein accession | YP_003339454 |
|---|
| Protein GI | 271965258 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.17753 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.608105 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGTTTC GCGTTCTGGG CCCTCTGGAG GTAGTCACCG GCGACCAACG GCTCGACCTG
GGAGGCATCA GGCAGCAGAC CGTGCTCGCC GCCCTCCTCC TCGACGCCAA CCGAGCGGTC
ACCACCGGCC GGCTCATGGA GGCGATCTAC GGAGACGATC CCCCCACCAC CTCGCGGGCC
CAGGTGCAGA TCTGCATCTC CGCGCTCCGG CGCCTCTTCG CCGCCCACAG CAGCGCCGAC
GTCATCTCCA CCCAGTCCCA GGGATACGCG ATCCAGGCCG ACAGCAGCCA GATCGACTCG
CACCGCTTCG AGAAACTCGT CCTGCAGGCC CGGCGCGCCC GCGAGGACCG CAACCTCGAC
GAGGCCATAA AGCACTACCG CAAGGCGCTC GCGCTCTGGC GCGGTCCCGC CCTGGACGGC
ATCGAGAGCA GGCTCGTGCA GTCGGCGGCG AGCAGGCTCG CCGAACACCG GATCACGGCG
AACGAGGACT GCGTCCAGCT CGAACTGGAC CTGGGCAGGC ACCACGAACT GGTCGGCGAG
CTCACCGAGC TCGTGGAGGA GTATCCGCTG CGCGAGCGGC TCCGCGGCCA TCTCATGCTG
GCGCTGTACC GCTCGGGACG CCAGGCGGAG GCGCTGCAGG TCTACCGGCT CGCCCGGCAG
ACCATGATCG ACGAACTGGG GATCGAGCCC AACGAGCGGC TCCAGCAGCT CGAATACGCC
ATCCTCACCT CCGACGAGAG CCTCGACCTG CCGGCGCAGC CCGCCAAGGT CGTCGAGGAG
CCGACGGCCC GCGTCCCGAA CTCGCCGAGC ATGCTCCCCA CCGACATCGC CGACTTCACC
GGCCGCACCA AGCAGATCGA CGACATCCGC CAGCGGCTGA CGCTCGCCGT CGACGACCGG
TCCCGCTTCG CCGTACCGAT CATCGCGATC GTCGGGAAGG CGGGGATCGG GAAGACCACC
GTCGCGGTGC ACTCCGCGCA CAGCGTCGCC GAGCACTTCC CCGACGGGCA GCTCTACGCC
GACCTGCACG GAGGCGTCTC TCGCCCGACC AGCCCGATGC AGGTGCTCGA ACGGTTCCTG
CGCGTGCTCG GCGTGCCCGG CACCGCGCTC CCCGACGGCC TGGAGGAGCG GGCGGAGATG
TACCGCTCCC TGCTCGCCGA CCGCAGGATG CTGATCGTGC TGGACGACGC GGGCAACGAG
AGCCAGGTCC TGCCGCTGCT TCCGGGCAAT CCCGCCTCCG CCGTGATCAT CACCAGCCGT
AGCCGGCTCG CCGGGCTGGC CGGCGCGATC CACGTCGACG TGGACGTTTT CGATTCGAGC
CAGTCGATGG ACCTGCTGTC CCGGATAGCG GGTGTGGAGC GGGTGCAGTC CGAGGCGGAG
TCCGCCGCGG CGCTGGCCGA GCTCTGCGGG CAGCTCCCCC TGGCACTCCG CATCGCCGGC
GCGCGGCTCC TGGCGCGCCC CCACTGGAGC ATCGAGCAGC TCGTGGGGCG GCTGGAGGAC
GAGACCCGCC GGCTGGACGA GCTCAAACAC GGCGACATGG GGATCAGGGC CAGCATCTCG
CTGACCTATG ACGGCACCGG CGACGACGCC CGGCGGCTCT TCCGCCGCCT GGCGATCCTG
GACTCCCAGA TCTTCTCCGC CTGGATCAGC GCGGCCCTCC TCGACATGCC CTTCGCCGAC
GCGCAGGACC TGCTGGACGA CCTGGCCGAC GCGCAGCTCG TCGAGACCAC CGGAGTCGGG
CGTGGCGTGC ACACGCAGTA CAGGTTCCAC GACCTCATCC GGGTGTTCGC CCGGGAGCGT
CTCGCCGCGG AGGAGTCCGC CCCCGAGCGG GGCGCGGCGC TGGCCCGCGT GCTCGGCGGC
CTGCTCTTCC TCGCGGAGGC GGCCCGCCGC CGGGAGTACG GCCCCGACAT CCTGATCCAC
AGTGACGCCT CCCTCTGGTC GCTGCCCAGG GATCTGGTCG ACCAGCTCAT CGCGGTGCCG
CTCGCCTGGT TCGAGCGCGA GCGCATGATC CTGGTCTCCG GCATCCGGCA GGCGGCGCAG
GCCGGCCTCG TCGAGCTCTG CTGGAGCCTC ACGATCAACG CGGTGACGTT CTTCGAGGCG
CGGGTCTACC TCGACGACTG GCGGGAGACC CACGACATCG CGCTGGCGGC CACCCGGCAC
GCCCGGGACA AGCGCGGCCA GGCGGCGATA CTCCACTCGA TGGGCTCGCT GGCCATCACC
GAGCAGCGAT TCGACGACGC GCAGCGCGAA TTCGAAGCGG CGGTCAGGCT GTTCCGGGAG
GTCAGCGACG ATCGCGGCGT CGCCATGGCC ATCCGCAACA TCGGGTTCCT CGACCGGATG
AACGGCCGCT TCGACGAGGC GGCGGCGCAC TACGAATGGG CGCTGGAGAT CTTCCGCACG
ATCGGGGACC AGGTCGCCGC CGCCTACGCG CTCCACAACC TGGCCCAGCT CAGGCTGGAG
TTCGACGACC TCGAAGGCGC CAAGCGGCTG CTGTCGGAGG CGCTGCAGCT CAGCGGGAAC
GGCGGCAGCC GAAGGGTGCG GGCCCAGGTC CTGCACCGGA TGGGCCACGT CCACCTCCAG
TCGGACGAGC CCGCCCTCGC CGCACGCGTC TTCGACGAGG CGCTGACCGT CGTCAGGGAC
ATCGGCGACC CCACCGGAGA GGCGTACGCG CTGCACGGGC TGGGCATCGC ACGGCTCCGG
CAGGGCATGC TCGCCGAGGC GGAGGGGGCG CTGCGCCACG CCCTGATGCT GGCCAGCACA
TCCAGCCAGC GGCTCGCGGA GGCGCGGGTG CTGGTCGGGC TGGGTGAGCT GACCATCGCG
TCGGGCAATC CGGCACAGGC CGTGCCCTAT TTCCAGCAGG CCCTCACCCT GTTCCGCCGG
ATACAGGTTC CGGTGCACGA GGCCCGCACC CTCATCATGC TCGGCGACGC GCACCTGGCC
GCCGGAGACA GTTCCGCGGC CCACAACGCG CTGGCCGAGG CCCACGCCCT GGCCGAAAAG
CTGGATCCCC CGGCGGCCGA GCAGGTGCGC GAACAGCTCG CCGAAAGGGC GCGCGGCCGG
GCGGAGTGA
|
|---|
| Protein sequence | MEFRVLGPLE VVTGDQRLDL GGIRQQTVLA ALLLDANRAV TTGRLMEAIY GDDPPTTSRA
QVQICISALR RLFAAHSSAD VISTQSQGYA IQADSSQIDS HRFEKLVLQA RRAREDRNLD
EAIKHYRKAL ALWRGPALDG IESRLVQSAA SRLAEHRITA NEDCVQLELD LGRHHELVGE
LTELVEEYPL RERLRGHLML ALYRSGRQAE ALQVYRLARQ TMIDELGIEP NERLQQLEYA
ILTSDESLDL PAQPAKVVEE PTARVPNSPS MLPTDIADFT GRTKQIDDIR QRLTLAVDDR
SRFAVPIIAI VGKAGIGKTT VAVHSAHSVA EHFPDGQLYA DLHGGVSRPT SPMQVLERFL
RVLGVPGTAL PDGLEERAEM YRSLLADRRM LIVLDDAGNE SQVLPLLPGN PASAVIITSR
SRLAGLAGAI HVDVDVFDSS QSMDLLSRIA GVERVQSEAE SAAALAELCG QLPLALRIAG
ARLLARPHWS IEQLVGRLED ETRRLDELKH GDMGIRASIS LTYDGTGDDA RRLFRRLAIL
DSQIFSAWIS AALLDMPFAD AQDLLDDLAD AQLVETTGVG RGVHTQYRFH DLIRVFARER
LAAEESAPER GAALARVLGG LLFLAEAARR REYGPDILIH SDASLWSLPR DLVDQLIAVP
LAWFERERMI LVSGIRQAAQ AGLVELCWSL TINAVTFFEA RVYLDDWRET HDIALAATRH
ARDKRGQAAI LHSMGSLAIT EQRFDDAQRE FEAAVRLFRE VSDDRGVAMA IRNIGFLDRM
NGRFDEAAAH YEWALEIFRT IGDQVAAAYA LHNLAQLRLE FDDLEGAKRL LSEALQLSGN
GGSRRVRAQV LHRMGHVHLQ SDEPALAARV FDEALTVVRD IGDPTGEAYA LHGLGIARLR
QGMLAEAEGA LRHALMLAST SSQRLAEARV LVGLGELTIA SGNPAQAVPY FQQALTLFRR
IQVPVHEART LIMLGDAHLA AGDSSAAHNA LAEAHALAEK LDPPAAEQVR EQLAERARGR
AE
|
|---|
| |