| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3790 |
|---|
| Symbol | |
|---|
| ID | 8667080 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 4220225 |
|---|
| End bp | 4222042 |
|---|
| Gene Length | 1818 bp |
|---|
| Protein Length | 605 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | |
|---|
| Product | Serine/threonine protein kinase-like protein |
|---|
| Protein accession | YP_003339453 |
|---|
| Protein GI | 271965257 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCCC GCGCGTCCGT CCCGTGGACC CTCGGCGGGA GATACGCGCC CGAGCGCCTC
CTGCTCCAGA ACGACGAGTG CGACCTCTAC CTCGCCTACC CCCACGGGGG TGACTCCACG
GCGGTGACGC TCAGGATCTA CCGCCCGGGG CTGAACGCGG ACCCGGCCCT GCTGGAACGG
GTGGCCGGCC TCATCACGGC GGAGCCGTAC ACCACGAGGC TGATCGACTA CGACCGCTCG
AAGGCGACCT GGCTGGTCCA GGAGTTCCTC CCGCTGGGAA GCCTGCGCGA CCTCCTGAAC
TTCATGAACA GGGGGCCGTT CCACGAGGAG CGGTCATGCG AGGTCGTGGC CGCCGTCACC
CGCTGCCTCG ACGGCTGGCA GAAAGCCCTG GGACACGAGG TAGGCGACTT CGGCCCCGAG
GACCTGCTGG TCAGGCAGAC CGAGCCGTTG GTCCTGGCGC TCGGCCACCA CCGTGCCGCA
CAGTGGGCGG CCCTTCCCGG CGGCTCTCCC TGGCCCGCGC CGCCCGAGAC CCTCGAAGGG
GTCCGCGGAG CCCCCGCCGC CTGGTGGACG CTGGGTGTCG TCGCTCACGA GCTCCTGACC
GGGCGTCCTC CGGTGTTCGA GCCGGGTGAC GCGGACGTCG AGCTCGGAGC CGTCGACCGG
GAGCGCTGGG AGCCGCTGCT CGCCGGGCTG CTGGCCGTCG ACCCCGCCAC CCGGTGGGGC
GCGGCCGAGG TGCGGTCGTG GCTGGCGGGC GCCGAGCCGC CCGTCGCGGC CGTCCGCCGG
TACGCTCCCG TGGAGTTCGC CGGCCGGCAC CACGCCACCC CCGCCGCACT GGCGATCGAC
CTGACCGCGC GGCCCGGGGC GGCCGAGACC TGGCTGCGCG ACGGCGGCCG GAACCGCCTC
GTGGCCTGGC TCGATCGCGA GGTCCGCGAC GAGCGCTTCG ACCGGGAGTG GCTCGACAAG
GCGGAGCCCG TGGCCGTCGC CGCCTTCGCC GCCGCGTTCA CGGCCGGGCT GCGGCCGAGA
TACCGGGGGA TGGCCATCGA CGCCGAGGGC CTCCTCGACC TGGCCAGGGG CGGATCGTCC
GGCCACCACG CCGTCGCCGA CGCCATGGCG GCCGGCGCGC TCGCCCACGC GGCCCGCCAC
CGCTGCTCGC ACCCGGAATG CCCGGAGGGT ACGGCGGGCG GATGCGCGCG CCTGCTCGCG
GTCGAGGCCG AGGTCCCCGT CGTGATGGCC GAGGTCCGCG CCGTGCTCGA CCGGCTGTAC
GACATCGTCG GGCCGGTCTC CGCCGGAACG TGGGAGCGGG GCGTGGCGGC GGCCGTCGAG
CTGTGCCTGG TCCCGCAGGC CGCCCGCGCG CAGCGGTGGC GGCTGCGCGC CGAAAGCCTG
CACCCGCTGC GCCGGGCCGC GATCGGGCGG GTCACCTGGT GGGCGGAGCA GCGCAGGAAA
GCCCTGAAGG GCAACGCCGG GGAGGTCGAG ACCCGCGCCG CCATCGTGTC GGTGCTCCTG
CTCACCTCAA GCGCCGACGA GGCCGGCAGG CAGCTCGCCG AGGAGAGCCG GGAGGAGTTC
CGGCGACGGC GGCAGGAGCT CACGGACCAG GGGCGTTCGG TCCTGGTCCG GGCCGGCGGG
GCCGCCGAGT CCCTCTGGTT CGAGCTGCGG CTGCGTTACC CGGCGATCAG GTCGGCGGTG
ACGCGGGCGC TGGTGGAGCG CTCCGAGAGC GGGCTCTCCC GGGGTCAGGC GAGCTGGCGC
CGCGCGCGGG TGCGCTGGCA GGGCCGGTAC GGCCGCTGGC GGCTCGACCG CGCGGAACGG
CGGCGGGTGG GGCGCTGA
|
|---|
| Protein sequence | MIPRASVPWT LGGRYAPERL LLQNDECDLY LAYPHGGDST AVTLRIYRPG LNADPALLER
VAGLITAEPY TTRLIDYDRS KATWLVQEFL PLGSLRDLLN FMNRGPFHEE RSCEVVAAVT
RCLDGWQKAL GHEVGDFGPE DLLVRQTEPL VLALGHHRAA QWAALPGGSP WPAPPETLEG
VRGAPAAWWT LGVVAHELLT GRPPVFEPGD ADVELGAVDR ERWEPLLAGL LAVDPATRWG
AAEVRSWLAG AEPPVAAVRR YAPVEFAGRH HATPAALAID LTARPGAAET WLRDGGRNRL
VAWLDREVRD ERFDREWLDK AEPVAVAAFA AAFTAGLRPR YRGMAIDAEG LLDLARGGSS
GHHAVADAMA AGALAHAARH RCSHPECPEG TAGGCARLLA VEAEVPVVMA EVRAVLDRLY
DIVGPVSAGT WERGVAAAVE LCLVPQAARA QRWRLRAESL HPLRRAAIGR VTWWAEQRRK
ALKGNAGEVE TRAAIVSVLL LTSSADEAGR QLAEESREEF RRRRQELTDQ GRSVLVRAGG
AAESLWFELR LRYPAIRSAV TRALVERSES GLSRGQASWR RARVRWQGRY GRWRLDRAER
RRVGR
|
|---|
| |