Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3716 |
Symbol | |
ID | 8667004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 4117437 |
End bp | 4118699 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase |
Protein accession | YP_003339382 |
Protein GI | 271965186 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000326785 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.473194 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAACAGGA CCAAGATCCG GGAACGTTTC GCCTGCCAGA AGGTACCCAG GGGAGGAGTG GTCGTCGCCT CCTCCTTCGG ACACCCCGAC CGGGGGGTGA TCGAGTGTCC GGCCGCGCCG GCCCTGGGCG CGGCGCTGGC CCGCGACGGG CTGCGCGTGC GCTACGCGCC GCTGACCGCG GACCCGGCCG GCCGGCCCGC TCCCCGCGGC GGCCACATGC TCGCCGTCTC CTACCTCGAA CGCGACGGCC GTGCCGCCGG CCTCGCGGCC GCCGTCCACC CCGACGATCA TGCCGCCACC GAGGTGGTCG GCGACGCGAT GAGGCGGTGG GAGGCCGCCA TGCGCAGCCG CCGCGTCCTG CTGGCCGGCA CCCGGCCGGC CTGTCCCGGT GCCCGGCGGG CCCTGGAGAT CACCCGGGAC ACGGCCGGCG GCGGCCAGGC GGTGTTCAGC TACGGCCCCG TCACCGACGA CCCCCACCAG GCCGGGGCCC TGACCCGCGA GGGCGTCACC ACGGTCACCG ATCTCGACCG GCTCCCGGAG GGGGCCGGCG TCGTCTTTCC CGCCCACGGC GTGTCCCTGG CGCTGCGCGC CGAAGCCGCC GCCCGTGGCC TGACGATCAT CGACGCCACC TGCCCCCTGG TGGCCGCGGC CCACGCCGAG GTGGCGCGCT TCACCGAACG CGGAGACCTC ACCGTCGTGA TCGGCAGGTC CGGTGACGCG GCCGTCTCCG CCGTCCTCGG CCAGGCCCCG GAATCGACCG TCCTGGTGGA GAGCGCCGCC GACGTGGAGC GGCTCCGGCC GGCCGACCCG GAGGCGATCT CCTACCTGGT CCAGACCGGC ATCCCCGTCG AGCAGGCCAC TCCCGTCGTC GCCGCCCTCC GCGCCCGCTT CCCCGCCCTG CGCGGTCCCG ACCCCGGCGA CTTCTGCTAT CACGCCTCCG ACCGCGCGAG CGCCGTCGCC TCCATCACCG GCGCCAGCGA TCTCCTGCTC ATTGCCGCGG GATCACACTG CCCGGACGCC CGGCACGTCG TCCGCCTCGC CGAGCCGGCC GGCGTCCCGG CGCAGGTCGT CACCGGCGTC GCCGACCTGT GCCCGGACCG GCTGCGGGAG GCCGCCACCG TCGCTCTCAC CAGCGCCCGG TCGGCTCCGG CCGGGCTCTC CGAGCAGATC GTCACGATCC TGTCCGGCCT GGGCCCTCTC GGCGTCGTCA ACCGTCACGT CACCAGCGAC ATCGTCACCG GCCGGACGCG CGCGCGGGCG TGA
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Protein sequence | MNRTKIRERF ACQKVPRGGV VVASSFGHPD RGVIECPAAP ALGAALARDG LRVRYAPLTA DPAGRPAPRG GHMLAVSYLE RDGRAAGLAA AVHPDDHAAT EVVGDAMRRW EAAMRSRRVL LAGTRPACPG ARRALEITRD TAGGGQAVFS YGPVTDDPHQ AGALTREGVT TVTDLDRLPE GAGVVFPAHG VSLALRAEAA ARGLTIIDAT CPLVAAAHAE VARFTERGDL TVVIGRSGDA AVSAVLGQAP ESTVLVESAA DVERLRPADP EAISYLVQTG IPVEQATPVV AALRARFPAL RGPDPGDFCY HASDRASAVA SITGASDLLL IAAGSHCPDA RHVVRLAEPA GVPAQVVTGV ADLCPDRLRE AATVALTSAR SAPAGLSEQI VTILSGLGPL GVVNRHVTSD IVTGRTRARA
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