Gene Sros_3705 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3705 
Symbol 
ID8666993 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp4100796 
End bp4102469 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339371 
Protein GI271965175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.483181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.136087 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTTGACA AAAAACGGGG GATCATCGGG CTGGGCGCAC TCGCCCTGAC CTTCCTGACC 
TTCCTGGCCG TTCTGGCCTG CGGGCCGGTC GAGCTCTCCC TGGCCGACAG CCGGGGCAGG
GTCACCTGCC AGAGTGGCCA GTTCTCCACC GTGACGGGGA CCGACGCGAT GAGAGGGCGG
GTCGCCTTCG TCGGCCTTCC CCCGGTGGAG CTGGGCAGGG ACGTCGACTG GCGTGCCGAC
CCCTACCGGA ACCGCTCGTG GGCGCTGAAC CTGCACACCC TGCGGTGGAT GGGGCGGCTG
GTCGTGGACT ACGAGGCCAC CGGGCGGCGC GAATACCTCG ACCGGGCCAC CGAGATCGCC
AGGGACTGGG TGCGCGACAA CCCGCGTGGA ACGGCCGGTG TCAGCCCGTG GGCCTGGGCC
GAGCATCCGG TGGCGCTCCG CGCCCCGGCT CTGGTCTGCC TCAGCGCTCA CGTCAAGGAC
GACTGGCTGG CCGCCAGCCT GGCCGAGCAC GCCGAGATCC TGGCCGACGC CACCCTTTAC
AAGGGCGGCC ACAACCACGG CCTGGACCAG GACATCGCGC TGCTGGGCAT CGGCTGCCGC
TTCGGCGAGC AGAGGTGGAC GGCTCTGGCG CTGCGCCGGA TGACCGCCTC GGCCAGGTTC
GCCATCGACG CGCAGGGAGT GCTGCGCGAG CAGGCCCCGC GCTACGGGCT CTACGTCCAC
CAGCGGATGC GCGTCGCGAT GGAGCAGATC AAGGACTGCG GGGTCGGCAT GCCCGCCGAG
CTCACCCGGC GGTGGCGGTC GCTGGAGGAC TACGTCGCCC ACGCCACCCA GCCCGACGGC
CGTCTGGCGC CCATCGGCGA CAGCCCCGCC GACCTGCGCC CCAAAGGGAT CTCCCCGAGG
AAGGACACCG TGAAGGTGTT CACGGGCGGC TACGTCTTCG GCAGGACGGC CTGGCAGGAC
GCGGACTCGG CCTATTATTC GATCAGGTTC GGCCCCGGGC GCGCGCTCCA CGGGCACGAG
GACCATCTCG GTGTGAGCTA CCACGCGCGG CGGCGCGACA TCCTGGTGGA GGCGGGCTTC
CACTCCTACG AGAAGACGCC CTACCAGAGG TGGACGCTCT CGCCGCAGGC CCACAACGTT
CCCGTCGTGG TCGGCGCGGA CTTCCGGGAA GGTACGGCGG CACGCCTGCT GGGGGAGGCC
GCCGGCCGTA CGCGCCAGTC CTTCCGGCTC GCCGACGAGG CCTACGGCCT CACCCGTACC
CGGTCCGTGC TGGTCGAGCA CGGCACGGAT CTGATGGCCG TACTGGACGT GGTCCCGCGG
GGGCGGCAGG TGCGCCCGCT GTGGCACCTC GGCCCCGCGC TCAGCGCGAC CGCCGCGGGG
GACGGCAGGG TGGTGCTGGC CGACGGGCGC TGGCGGGCGT CGCTGATCCA GCTGGAGATG
CCCGCGTGCA GGCCGATCGG CGGCCAGTCG GTCCGGTCCG GGGAGATCTC GCCCGGTTAC
CTGAAGAGGA TCAAGGTCCC GACGGTGGTC TCCCCGGCGG CGGGAGCCCT GCTGACCGTG
ATCGTGCCGG GCGCCGCCGA CCCGGAGATC TCCTGCTCCG GTGGGAACGT GCGGGTCCGG
ACCCCGGGCG GCACGGTCTC CTTCACGGCA GACGTCTCCA CGGGGCTCGT CTGA
 
Protein sequence
MLDKKRGIIG LGALALTFLT FLAVLACGPV ELSLADSRGR VTCQSGQFST VTGTDAMRGR 
VAFVGLPPVE LGRDVDWRAD PYRNRSWALN LHTLRWMGRL VVDYEATGRR EYLDRATEIA
RDWVRDNPRG TAGVSPWAWA EHPVALRAPA LVCLSAHVKD DWLAASLAEH AEILADATLY
KGGHNHGLDQ DIALLGIGCR FGEQRWTALA LRRMTASARF AIDAQGVLRE QAPRYGLYVH
QRMRVAMEQI KDCGVGMPAE LTRRWRSLED YVAHATQPDG RLAPIGDSPA DLRPKGISPR
KDTVKVFTGG YVFGRTAWQD ADSAYYSIRF GPGRALHGHE DHLGVSYHAR RRDILVEAGF
HSYEKTPYQR WTLSPQAHNV PVVVGADFRE GTAARLLGEA AGRTRQSFRL ADEAYGLTRT
RSVLVEHGTD LMAVLDVVPR GRQVRPLWHL GPALSATAAG DGRVVLADGR WRASLIQLEM
PACRPIGGQS VRSGEISPGY LKRIKVPTVV SPAAGALLTV IVPGAADPEI SCSGGNVRVR
TPGGTVSFTA DVSTGLV