Gene Sros_3573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3573 
Symbol 
ID8666861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3962132 
End bp3964126 
Gene Length1995 bp 
Protein Length664 aa 
Translation table11 
GC content64% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339250 
Protein GI271965054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0309383 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTACA CCGGTCCGCT TCCCCGAAGC CTTGATCCGC TGCCGGATGA AGTCATGCCC 
GGTTACCTGC TCCGACTCGC GCACCGGCTG GACCGCACAC CGGCGCGGTT ACTGCAGATC
ACGGGCCTGA TCCCCGAACG GTCGAGGTTT CCCTCCCGCG CTTCCCATGA ATTGCTGATA
GCTCTTGACC AGCCGACACG TGAAGCGTTC ACAAACGCGA CAAGGCTCAC CCCAGCCGAA
GCTGAAGCGC TCTGCCTCAG ATCACTCGCA CCCCGTTACC CAGTCCCACC GCCCGCCCAG
GGCATCGCGC TGCGTCAGCT GGCCCTGAGG ACGGACTGGT GGATCTTCAC CACCGGATCA
CGCTACTGCC CCGAATGCCT GACCGGGGAC AACAGCCCAG TCCAGCAAGC CCACGGCGGC
GCGTGGCGGA GATCATGGCG GCTACCAGCC ATTTTCGCCT GCATCAAGCA TCGGCGCCTT
CTGAATCACC TCTGCCCAGG CTGCGGTCAT CCCGCGCACG CGGCTGTGGC TGGCTCCGGA
CTCATTCCTC TCCTGCAGTC GCTGAAGGTC GGCGGGCTTC ATCCCGCACA GTGCCGATCC
AGCACCGTGA ACGGCACCTC CGGCATCCTC AAGGGCGTCA CCTCGGTTTG CGCGGCCAGG
CTCGACACCG CGCCTCCACC AGGCCATCTG CTGCCCGAGG AGGTCCTCAG CCTCCAGGAG
CGTCTCGACG CCCTCCTGCA ACCTCACGGC CCCACACAGG TCGACGCCGC CGGACTCCCT
GCTGAGCCCG CCCAGTACTT CACCGACCTG CGTTTCCTCA GCAAACTGAT CAGCTTGTCC
TGGCCCAAGG CCGCCTACCT CGCCCCCTCC GCAGCGCTCC GCGAAACCCT CGACCAGCGC
ACCGCACGAC GCACCCAAGA AGCCGAGAAT TCCCTGCCAC CAGTCGACAG ATACCGCCAC
AGTTGGGAAC TGGACCCCGC CATCAGTGCC GCTCAGCTGG CCATCGCCGA CCAGATCCTG
CACGGTGACA CTCTGCAAAC CCGACAGCAC CTTCAAGAAC TACTCTCGAC CGGCGGAACC
AGGCTTTCGA TCAACCGAAC AGAGTGGAGA GGCCACTTCC TCGAAAGCGC CAGGACTACA
GCATGCTCGC CTGGTCTCCG TGCCGCTCTG GCCCCTCTAA CCAACGCGTT CCGCCGTCAC
AGCCGCACCA GCTCCATAAC CCCCGAACTA AACACCCGCC TCGGCCCTCA GCACATCCCC
CAGTGGCTGC CTGATGAATG GTTCGAACGC TATCTCAGCA GCTTCGACGG CATCTCGACG
CTCGCGCTCC GCCGCACCGC CGCAATTCGT CTCGTCCAGA TGATCTCCGG TGGGTCGCGA
GGGAAAGCTG CTCAGTACCT CGGGATGACA GTCTTCCCGC ACATACACCG CGGAACACCC
ATCTGCAGAT CCGTCACAGG AGCGTTCCAA TGGGCACGAG CCCGCAGCGA CCCAGACGAA
TTCGACGCCG CCGTCCGCGC GATCGCCGCT GACCTCGACC AGACCGCGCA TCTCATCGAC
TACCATCATC GCCGCACCGC GCTGCGGAAC TGGTGCCTCG ATACCGACAC CTGGCAGAAG
ATCCTCGACC AGAGCGGGTT CGCCAGCCAT CAGTGGGAAA CCACCGACCG AGAGCGCCAA
TACGCATCCA CCCACCTCTG GGCCCAGATA ACCCAGGGTG AACGGTCGTT CGCCCCTCAC
CCCATCCGCG ATCAACAACC CCTCGACATC CAAAAGTCGT GGAGCAACCG AGACCGCCCG
TCCAACTGGC CGGCTAGCCC TCACCGCCCC TTCGGCTCGG GAACATACGT CTGTCGGCGA
TACAGGGCCC TCAGAGAGAC ACTCGACGCC TACGCTGCCG AGCTAACCGC CCAGATCGAT
AACAAGCCAA TTCGCGCCAC ACACGACACG AGATCGGACG AGATAAAACC GGCCCCTCCA
CCCACCCTGA CCTAA
 
Protein sequence
MRYTGPLPRS LDPLPDEVMP GYLLRLAHRL DRTPARLLQI TGLIPERSRF PSRASHELLI 
ALDQPTREAF TNATRLTPAE AEALCLRSLA PRYPVPPPAQ GIALRQLALR TDWWIFTTGS
RYCPECLTGD NSPVQQAHGG AWRRSWRLPA IFACIKHRRL LNHLCPGCGH PAHAAVAGSG
LIPLLQSLKV GGLHPAQCRS STVNGTSGIL KGVTSVCAAR LDTAPPPGHL LPEEVLSLQE
RLDALLQPHG PTQVDAAGLP AEPAQYFTDL RFLSKLISLS WPKAAYLAPS AALRETLDQR
TARRTQEAEN SLPPVDRYRH SWELDPAISA AQLAIADQIL HGDTLQTRQH LQELLSTGGT
RLSINRTEWR GHFLESARTT ACSPGLRAAL APLTNAFRRH SRTSSITPEL NTRLGPQHIP
QWLPDEWFER YLSSFDGIST LALRRTAAIR LVQMISGGSR GKAAQYLGMT VFPHIHRGTP
ICRSVTGAFQ WARARSDPDE FDAAVRAIAA DLDQTAHLID YHHRRTALRN WCLDTDTWQK
ILDQSGFASH QWETTDRERQ YASTHLWAQI TQGERSFAPH PIRDQQPLDI QKSWSNRDRP
SNWPASPHRP FGSGTYVCRR YRALRETLDA YAAELTAQID NKPIRATHDT RSDEIKPAPP
PTLT