Gene Sros_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3564 
Symbol 
ID8666852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3950375 
End bp3951028 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content71% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339241 
Protein GI271965045 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.394377 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAG GGCTGCGAGA ACGGAAGAAG CGGCAGACGC GGCAGCGCAT CTCCCGGGTG 
GCCACCGGAC TGTTCGTGGA GCGGGGCTTC GAGCACGTCA CGATCGCCGA GGTCGCCGCG
GCGGCGGAGG TGTCCGTGAA CACCGTTTAC AACTACTTCG AAGCCAAGGA GGACCTCGTC
CTGCCACCGG ACGAGGCGTC GCCGCAGCGG CTCGCCGATA TCGTGCGGGG CCGGTCCCCC
GGCGAGCCCG CCGTACAGGC CGTGCTGGCC CGTCTGCGTG ACGAGGTGCG GCGCCGCGAC
CGCAAGGTGG GGCTGACCGA GGGGTTCGGC CGGGTTCTGG AGATGATGCA GGCCGCACCC
ACGCTCACCG CCCGGCTGGG TGACCTCGGC CGGCAGATGA CCGAGGCGCT CGCCGACGCG
CTCGCCGAGG AGACCGGGGC GGCGCCGGAC GACCCGCTCC CTCGCGTGGT GGCCTGGCAT
CTCGGCTGCG TGCACTCGCT GGTGTACGCC GAGATCGGCA GGCGCACCGC GGCGGGGGAG
AGTCCCGACG CGATCGCCGA GGCGGTGCTG GAGCTCCTCG ACGCCGTCGA GAGCCTGCTC
GGCGAACGCG TCCTCACCTA TGCCGTACGA AAGGACCAGC CATGTTCAGA GTGA
 
Protein sequence
MTEGLRERKK RQTRQRISRV ATGLFVERGF EHVTIAEVAA AAEVSVNTVY NYFEAKEDLV 
LPPDEASPQR LADIVRGRSP GEPAVQAVLA RLRDEVRRRD RKVGLTEGFG RVLEMMQAAP
TLTARLGDLG RQMTEALADA LAEETGAAPD DPLPRVVAWH LGCVHSLVYA EIGRRTAAGE
SPDAIAEAVL ELLDAVESLL GERVLTYAVR KDQPCSE