Gene Sros_3542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3542 
Symbol 
ID8666830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3929349 
End bp3930041 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339221 
Protein GI271965025 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.332756 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCTG AATCGACGCC GCGTCGGGCG ACCCCCGAAC GCATGGTCGA GATCCCCGCC 
GGGAAGATCA TCTTGCGGGA CGAGGGCACG GCGACGAACT GGAAGGCCGA GGTCGGGGCC
TTCCGGCTGG CGCCGTACCC CGTGACCCGC GAGCTGTACC GCGCCGTCCG GGGCGAGGCG
CCCGCGAGCC CGGCGGGGCC GCGGACGCCG GTGACCGAGG TCTCCTGGAA GGAGGCCGTC
CTGTTCTGCA ACCTGCTCTC GCAGGCGACG GGGTTCGAAC CCTGCTACTC GATGGGCGAG
GACCCCGACG GGCAGGACGT GGTCTGCGAC TGGGAGGCCG ACGGCTATCG CCTCCCGTCC
GAGGCGGAGT GGGAGTACGC GTGCAGGGCC GGGACCTCCG GCGTCCGCTA CGGAGAGCTG
GACGAGATCG CCTGGTACCG CGAGAACTCC GGCGGTGAGG TGCACGACGT CGCGACCAGG
GCGCCGAACG CGTGGGGCCT CCACGACATG ATCGGCAACG TGTGGGAGTG GTGCTGGGAT
GTCTACGACC CCAAGGTCTA CGGCCCGTAC CGCGTGTTCC GTGGCGGTGG CGCGCACGAT
CAGCCCCGAG GATGCCGGGC GTCGTGCCGC CGCAAGAGCC ACCCGACCTT CCGCGTCGAC
GACCTCGGGT TCCGGCTCGC CCGGTCACTG TGA
 
Protein sequence
MSPESTPRRA TPERMVEIPA GKIILRDEGT ATNWKAEVGA FRLAPYPVTR ELYRAVRGEA 
PASPAGPRTP VTEVSWKEAV LFCNLLSQAT GFEPCYSMGE DPDGQDVVCD WEADGYRLPS
EAEWEYACRA GTSGVRYGEL DEIAWYRENS GGEVHDVATR APNAWGLHDM IGNVWEWCWD
VYDPKVYGPY RVFRGGGAHD QPRGCRASCR RKSHPTFRVD DLGFRLARSL