| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3530 |
|---|
| Symbol | |
|---|
| ID | 8666818 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3911327 |
|---|
| End bp | 3913276 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | Dipeptidylaminopeptidase/acylaminoacyl- peptidase -like protein |
|---|
| Protein accession | YP_003339209 |
|---|
| Protein GI | 271965013 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00138387 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGAGA TTCTCGGCGC CCGCCCCCAC CCCGCGGTGG GGACGGGTCC CGCCGCCTGG
AACTGCTGGA CGCCCGCCCT GGCGCCCGAC GCGAGCGCGG TCGCCTTCGT CAGCGACAGG
GACGGCTCGC CGCGCGTCTG GATCAGGCCC CTCGGGCGGG AGGCGGAGTC CTGGCCGGTC
GACACCGGCC CGGAGCCCGC CGCCGACGTG AGCTGGTCTC CCGACGGCGG GCGGCTGGCC
GTACTCGTCG TGCCGGGCGG CGGGGAGCAC ACGCAGGTCT GGACGGTCCG GCCCGACGGC
GGCGACCTGC GCCCGCTGGC CTCCCCCGCG GGCGGGTCGG CCTCGTTCGT GCGCTGGACC
GGGCGGGGCT CGATCCTCCT GGTCGCCGAG GTCTCCGCGG CGGGCCGGAC GGAGGCGGTG
CTGATCGACG CCCACACCGG CGGCCGGGAG GTCGTGGCGG CGGGGGCGCT GATGCACCCG
GTGGCGATGA GCCGCGACCA GGGGCGGATG CTGCTGCGGC GGGGCCCGCG CGGCGTCCGC
CGGATGTACG TGGCGGACCT CCCCGCGGGC CTCCCCGGCG ACCTCGCCGA TCTTCCCCCG
GGCCTGCCCT CCGGTCTCCC CGGCGCCCTT CCCCCGAGCC TGCCCTCCGG TCTTCCAGGT
GGCCTTCCCC CGGGTCTTCG GGGAGGGGCC GTGGGCGGCC CGGGCGGGGA GCGGCCGCTG
CTGGCGGGGC TGCCCGGCTC CACCGACCAG GGCGCCCTCT CCCCCGACGG GATGACCGCC
TACCTGCTGT CCGACGCCGG CCGCGACCGG GCCGCGCTGG TCGCGGTGCG CGGGGACGGC
GAGGCGGTCG TGCTGGCCGA GCGGCCGGAC GCCGAGCTGG ACCGGTTCGC GCTGAGCGCC
GACGGCCGCC GCGCCGTCCT GCTCTGGAAC GACCGCGGCC GCTCCGAGCT GGAGGTGCTG
GAGACCGGTA CCGGCACGCT GCGCCCGCTC CCCCCTCCCC CGGCCGAGGT GGTGTCCTCG
GTCAGGATGT CCCTGGACGG CGGCCAGGCC GTGCTGGCGG CCGAGGGGCC CGGCCACCCC
TCCCACGTGC TGCTGTGCGA TCTGGCGACC GGCGGCTACC GGCAGGTCGC GGGGGCCGGT
CCGCTCGGCG CGCCGGCCGG GGCGGAGCCG GTGCGCTTCC AGGCGCGTGA CGGCATGGAG
CTGACCGGCT GGCTCTACCG GGTCCCGGGC GTCCAGGCCC CGGCCCCGTT CGTCGTCTAC
CTGCACGGCG GGCCGGAAAG TCAGGCACGG CCCACCTTCA CCCCGCTGTT CCGGGACCTG
CTGGCCGCCG GGATCGGGGT GTTCGCACCG AACGTGCGCG GGTCGAGCGG GTTCGGGCGG
GCCTTCCGCG ACGCCGACAA CCACGCGCTC CGCTTCCGCG CGATCGACGA CGTCGCCGAC
TGCGCCTCGG AGCTGGTGCG GCTGGGGGCC GCCGACCCGG CCCGGATCGC CTGCATGGGA
CGGTCGTACG GCGGCTACCT GACGCTGGCC GCCCTCGTCA CCCACCCCGG CCTCTTCCGG
GCCGGGGTCG ACGTCTGCGG GATGGCCGAC TTCGCGACCT TCTACGCGCG GACCGAGCCG
TGGATCGCCG CGGCGGCCGT CAGCGAGTAC GGCCATCCCA CCGCCGACCG TGACCTGCTG
CGGGCCCTGT CGCCCCTGCA CTCCTTCGAC CGGCTGAGCG CGCCGCTGCT GGTCGTGCAC
GGCGCCCGGG ACACCAACGT GCCGGTGCAC GAGGCCGAGC AGGTGCTCCA GGCGGCGCGG
GCCCGCGGGG TGCCCTGCGA CTTCCTGCTG TTCGAGGACG AGGGGCACGA GATCCGGCGG
AGCGCCAACC GGGTGACCTT CGTCAGGAAC GTCGTCGGGT GGCTCGGACG GCACCTGACC
GACCCCGCCC CGCCGCGTCG ATCCGCCTGA
|
|---|
| Protein sequence | MTEILGARPH PAVGTGPAAW NCWTPALAPD ASAVAFVSDR DGSPRVWIRP LGREAESWPV
DTGPEPAADV SWSPDGGRLA VLVVPGGGEH TQVWTVRPDG GDLRPLASPA GGSASFVRWT
GRGSILLVAE VSAAGRTEAV LIDAHTGGRE VVAAGALMHP VAMSRDQGRM LLRRGPRGVR
RMYVADLPAG LPGDLADLPP GLPSGLPGAL PPSLPSGLPG GLPPGLRGGA VGGPGGERPL
LAGLPGSTDQ GALSPDGMTA YLLSDAGRDR AALVAVRGDG EAVVLAERPD AELDRFALSA
DGRRAVLLWN DRGRSELEVL ETGTGTLRPL PPPPAEVVSS VRMSLDGGQA VLAAEGPGHP
SHVLLCDLAT GGYRQVAGAG PLGAPAGAEP VRFQARDGME LTGWLYRVPG VQAPAPFVVY
LHGGPESQAR PTFTPLFRDL LAAGIGVFAP NVRGSSGFGR AFRDADNHAL RFRAIDDVAD
CASELVRLGA ADPARIACMG RSYGGYLTLA ALVTHPGLFR AGVDVCGMAD FATFYARTEP
WIAAAAVSEY GHPTADRDLL RALSPLHSFD RLSAPLLVVH GARDTNVPVH EAEQVLQAAR
ARGVPCDFLL FEDEGHEIRR SANRVTFVRN VVGWLGRHLT DPAPPRRSA
|
|---|
| |