Gene Sros_3505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3505 
Symbol 
ID8666793 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3879720 
End bp3880835 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339184 
Protein GI271964988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.499354 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGGCG TGCTCGCCCA CGTGATCGAC GAGATCAACG AGATCCGGAG GACCCTGGGA 
CCGCGTGCGG CGTTCCGGGA CCCGGCCTTC CTCGGCGACC TGGCCGGCAG GCTGATGGAC
TCGCCGGTCC TGCGGGAACA GCCGGCCGTA CGGGCGTTCG CCGAGGATGC CCGTACGTTC
GGCGACGCCC CCCGGCTGAC GCGCACGAAG CTCCACATCA ACCAGGCTTC GGACAACCAC
GTCTTCTCGC TGTTCGACGC GTCCTACTTC CCGTCGCTGT CGCTCGACTA CCTGGTCTAC
CGGCCCCTGC CGGCCGACGA GCGGCTGGCC CGGCGGTATG CGAGCAACAC CGTCCCGGTG
ACGATCGAGA GGATGTCGGC GGGTTTCGAG TCACGGGTGG TCGTCGCCCT GTTCCCGGAG
AACCACCTCG ACGGATCACA GGCCGAGGAC GACCTGATCT TCTATTTCAT CGACAAGTTC
GTCGAACGGC ATCTCCGGCT GACGCGGCGG CTCATGACGG CCGTGACGGC GGAGGACGGT
TTCCCCCTTG TCCGCGCCGC GGGAGCCGCG GAGGTCGAGC GCGCCTCCTC ATGGTGGGTG
CGGCTGCACG AATACCACCA CAGGCAGGGT GACATGCCGA TCCCCGAATA CCTGCCGATA
AAGCGGCTGA AGCCGCTGGC GGGACTGGAG GAATTGCGCG CCGACGTCTC GTCGATGCTG
GCGTGCCTGC ATGACGACGC CCTTCCCGCC GAGGACGCGC TGCTGACATA CGAATACATT
CTGGCGGAGC GCCTGCTGCG TTACGCGGTG GAGGGGATTC CGCGTCCCAA CTACGACGCG
GTGGCCTCGC AGCTTCTGTT CAACTATCTG ATCGAGGCGC GGGGCGTCCG CCTGCGCGAC
GGTGTGATCC AGCTCGATCC GGACCTGCCG GCCGTACTGG CCGCTTTCCT GGCGGAGATC
CAGGCGATCG AACGACGGAT CCACACCGAG TCCGCCGAGC GGGTCCAGGG CAGGCTGCTG
GACTTCACCA ACCGCTACAC CGATTTCGAC GAGACGACGA GGGACTACCG CCACATCCCG
TACTTCGCTG AGGTCAAGCA GAGGCTGGGC CTCTGA
 
Protein sequence
MDGVLAHVID EINEIRRTLG PRAAFRDPAF LGDLAGRLMD SPVLREQPAV RAFAEDARTF 
GDAPRLTRTK LHINQASDNH VFSLFDASYF PSLSLDYLVY RPLPADERLA RRYASNTVPV
TIERMSAGFE SRVVVALFPE NHLDGSQAED DLIFYFIDKF VERHLRLTRR LMTAVTAEDG
FPLVRAAGAA EVERASSWWV RLHEYHHRQG DMPIPEYLPI KRLKPLAGLE ELRADVSSML
ACLHDDALPA EDALLTYEYI LAERLLRYAV EGIPRPNYDA VASQLLFNYL IEARGVRLRD
GVIQLDPDLP AVLAAFLAEI QAIERRIHTE SAERVQGRLL DFTNRYTDFD ETTRDYRHIP
YFAEVKQRLG L