| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3496 |
|---|
| Symbol | |
|---|
| ID | 8666784 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3866883 |
|---|
| End bp | 3868376 |
|---|
| Gene Length | 1494 bp |
|---|
| Protein Length | 497 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | mannitol dehydrogenase-like protein |
|---|
| Protein accession | YP_003339175 |
|---|
| Protein GI | 271964979 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.201819 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGTGA CCGCACTGAC GCAGGAGACG CTGGGAACCC TTCCCGGGGA GGTGGCGACT
CCCTCCTACG ACCGGTCGGA GCTCACGGCC GGCATCGTCC ACTTCGGGGT GGGCGGATTC
CACCGCGCGC ACCAGGCGAT GTATCTCGAC CGGCTGATGA ACGACGGCAA GGCGCATGAC
TGGGCGATCT GCGGTGTCGG GGTCCTGCCC GGCGACGCGC GGATGCGGGA CGCGCTGACC
GCGCAGGACG GCCTCTACAC GCTCGTGCTG AAGCACCCCG ACGGGACGCG CGAGGCCCGC
GTCATCGGGT CGATCGTCGA ATATCTCTTC GCCCCCGACG ATCCGGAGGC GGTCATCGAG
AAGATGGCCG GCCCGGCGGT GCGGATCGTG TCGCTCACGG TCACCGAGGG CGGCTACAAC
ATCCATCCCG TCACCGGGGA ATTCGACGCC GAGGCCCCCG CGATCCGCGC GGACCTGGCG
CCCGGCGCGG TCCCGGCCAC GGTGTTCGGA CTCGTCACCG AGGCGCTGCG CCGCCGGCGC
GCCCAGGGGG TCACGCCGTT CACCGTCATG TCGTGCGACA ACATCCAGGG GAACGGGCAC
GTCGCACGCC GTTCCTTCAC GGCGTTCGCC CGGCTCGCCG ACCCCGACCT CGCCGCCTGG
ATCGAGAGCT CCGTCGCGTT CCCCGACTCC ATGGTCGACC GCATCACCCC CGTCACCACC
GGCCAGGACC GTGAGGCCGT GGCCCGGCGG TTCGGTGTCG AGGACGCCTG GCCGGTCGTC
TGCGAGCCGT TCACCCAGTG GGTGCTGGAG GAGCGCTTCC CCGGCGGGCG TCCCCCCTTC
GAAGAGGCCG GAGTCCAGGT CGTCACCGAC GTGGAGCCGT ACGAGCTGAT GAAGCTGCGC
CTGCTGAACG CCGGCCACCA GGCGCTCTGC TATCTCGGTT ACCTCAGCGG GTACCGCTAC
GCCCACGAGG CCGCGACCGA TCCCGCGATC GCGGCGTTCC TGCTCGACTA CATGGACATC
GAGGCCACGC CGACGCTCCG GCCGGTGCCG GGCATCGACC TGGAGGCCTA CAAGCGGACC
CTCATCGAGC GGTTCTCCAA TCCCGAGGTG CGGGACACGC TCGCGAGACT GTGCGCCGAG
TCCTCGGACC GGATCCCGAA ATGGCTGCTG CCCGTCGTGC GGGAGCAGCT GGCCCGCGGC
GGTGAGGTCA CCCGCGCGGC CGCGGTGGTG GCCGGCTGGG CGCGCTACGC CGAGGGGATC
GACGAATCCG GTGAGCCGAT CGAGATCGTC GACCCGCTGC GAGACAGGTT GACGGCCGCC
GCAAGAAGGC AGCGTGAACA CCCCACGGCC TTCATCGAGG ATCGGGACCT CTTCGGCGAC
CTCGCCGACG ACAGGCGGTT CGTCGAACCG TATCTGCGCG CCCTCGAATC GCTGCACACC
CAGGGTGCCC GCGCGACGGT GCGGGAACTG GCGGGGCACG GAACGCGCAC GTGA
|
|---|
| Protein sequence | MAVTALTQET LGTLPGEVAT PSYDRSELTA GIVHFGVGGF HRAHQAMYLD RLMNDGKAHD
WAICGVGVLP GDARMRDALT AQDGLYTLVL KHPDGTREAR VIGSIVEYLF APDDPEAVIE
KMAGPAVRIV SLTVTEGGYN IHPVTGEFDA EAPAIRADLA PGAVPATVFG LVTEALRRRR
AQGVTPFTVM SCDNIQGNGH VARRSFTAFA RLADPDLAAW IESSVAFPDS MVDRITPVTT
GQDREAVARR FGVEDAWPVV CEPFTQWVLE ERFPGGRPPF EEAGVQVVTD VEPYELMKLR
LLNAGHQALC YLGYLSGYRY AHEAATDPAI AAFLLDYMDI EATPTLRPVP GIDLEAYKRT
LIERFSNPEV RDTLARLCAE SSDRIPKWLL PVVREQLARG GEVTRAAAVV AGWARYAEGI
DESGEPIEIV DPLRDRLTAA ARRQREHPTA FIEDRDLFGD LADDRRFVEP YLRALESLHT
QGARATVREL AGHGTRT
|
|---|
| |