Gene Sros_3490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3490 
Symbol 
ID8666778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3860765 
End bp3861877 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content70% 
IMG OID 
Productsugar ABC transportor, ATP-binding protein 
Protein accessionYP_003339169 
Protein GI271964973 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.662972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.445461 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGAG TCCTCTACGA CGAGGCGACC CGCGTCTATC CCGGATCCGA ACGGCCCGCG 
GTGGACGCCC TCGACCTCGA CATCACCGAC GGCGAATTCC TGGTCCTCGT CGGCCCGTCG
GGCTGCGGGA AATCCACCTC CCTGCGCATG CTCGCCGGGC TTGAGAGAGT CGACGGCGGG
CACATCGCCA TCGGCGAGCG TGACGTCACC CACCTGCCGC CGCGCGACCG GGACATCGCG
ATGGTGTTCC AGAACTACGC GCTCTACCCG CACATGTCGG TGGCCGACAA CATGGGCTTC
GCCCTGCGGG TGACCAAGGT CCCCAAGGAC GAGCGCGACC GCCGGGTCCG CGAGGCCGCC
CGCCTGCTGG ACCTGGAGGA GTTCCTCGAC CGCAGGCCCA AGGCGCTCTC CGGCGGGCAG
CGGCAGCGCG TGGCCATGGG CCGGGCGATC GTGCGCGAGC CGAAGGTGTT CCTCATGGAC
GAGCCGCTGT CCAACCTGGA CGCCAAGCTG CGGGTGCAGA CCCGCACCCA GATCGCCGAC
CTGCAGCGCC GGCTCGGGGT GACGACGGTC TACGTGACCC ACGACCAGGT GGAGGCCATG
ACGATGGGCG ACCGGGTCGC CGTGCTCAAG GACGGGGTCC TCCAGCAGGT CGACACGCCG
CTGCGCCTCT ACCAGCATCC GGCCAACGTC TTCGTCGCCG GCTTCATCGG CTCCCCGTCG
ATGAACCTGG CCGAGTTCCG CGTCGAGGGC GAGGAGGCGG TCCTCGCCGG GACGCGGGTA
CGGCTGACCC GCGAGACGCT CGGAGCGCTC AAGGCGGAGG GCAGCGACCG CGTCATCCTG
GGCTTCCGGC CCGAGGCCCT GGACGTGGTC GGCGAGAGCA AGGACTACAG GACCTTCCCG
GTCACCGTCA CCGTCGTCGA GGAGCTCGGC TCGGACGCCT TCCTCTACGG CCAGTACGCC
GACAGGACCT ATCCGGAGCT GCTCGAACAG ACCGTCATCG CCCGGGTCGA CCCCAACGCG
CCGCCCGCCA AGGGCGACCA GGTCCGGCTG CGGATCATGC CGGGCAAGGA GCGGCTCTTC
TCCGCGATCA CCGGCGAGCG GCTGCCCGCC TGA
 
Protein sequence
MARVLYDEAT RVYPGSERPA VDALDLDITD GEFLVLVGPS GCGKSTSLRM LAGLERVDGG 
HIAIGERDVT HLPPRDRDIA MVFQNYALYP HMSVADNMGF ALRVTKVPKD ERDRRVREAA
RLLDLEEFLD RRPKALSGGQ RQRVAMGRAI VREPKVFLMD EPLSNLDAKL RVQTRTQIAD
LQRRLGVTTV YVTHDQVEAM TMGDRVAVLK DGVLQQVDTP LRLYQHPANV FVAGFIGSPS
MNLAEFRVEG EEAVLAGTRV RLTRETLGAL KAEGSDRVIL GFRPEALDVV GESKDYRTFP
VTVTVVEELG SDAFLYGQYA DRTYPELLEQ TVIARVDPNA PPAKGDQVRL RIMPGKERLF
SAITGERLPA