Gene Sros_3488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3488 
Symbol 
ID8666776 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3858712 
End bp3859368 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339167 
Protein GI271964971 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0807596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.207081 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGAT CAGCCGAAGC CGTACCGCCC CCCTCCCCTG TGACCGCGGA CGACCTCGAC 
CGGGCCGTCC GGCTCGCCGT CGGCGCCCTC CGGGAGGCGC CCCCGGAGGC GTGGGACGAA
AAGGCCGGCT CGCTGGAGTG GGGCTGCTGG GAGACCGTCG AGCATCTCAG CGACGACCTC
TTCGCGTACG CCGCCCAGCT GGGCCTCAGG ACACCGCCCC TGGACCGCGA AGTGCCCTTC
GTGTGGGAGA GCCGCAGGCC CGGAGGTCCC CGGAACGCCA TCCACGCGGA CCGCGCGGCG
GGGCCGGCCG GGCTGTTGCA GGTGCTGGAG GCGAGCGGCG CGCTGCTGGT CGCCATGGTG
CGCACGACGC CGTCGCGGGT CCGCGTTCAC CACGTCTTCG GGGCGTCGGA CCCGGAGGGC
TTCGCCGCGA TGGGGATCGT GGAGACCCTG GTGCACACCC ACGATCTGGC CGGAGGGCTC
GGGCTCGCCT GGACCCCGCC CGCCGATCTG TGCTCGCGGG TGCTCGCCCG GCTGTTCCCG
GACGCCCCGA CGGACACCGA CCCCTGGACG GCCCTGTTGT GGGCCACCGG CCGCGCCGAG
CTTCCCGGGC ACCCGCGTCT CACCACATGG CGCTGGTACG GCGCGCCCCG GTCGTAG
 
Protein sequence
MSRSAEAVPP PSPVTADDLD RAVRLAVGAL REAPPEAWDE KAGSLEWGCW ETVEHLSDDL 
FAYAAQLGLR TPPLDREVPF VWESRRPGGP RNAIHADRAA GPAGLLQVLE ASGALLVAMV
RTTPSRVRVH HVFGASDPEG FAAMGIVETL VHTHDLAGGL GLAWTPPADL CSRVLARLFP
DAPTDTDPWT ALLWATGRAE LPGHPRLTTW RWYGAPRS