Gene Sros_3478 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3478 
Symbol 
ID8666766 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3848790 
End bp3849236 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339157 
Protein GI271964961 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00929426 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00647977 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGACAATCG AGAACCCCCG TCCAGGTCCG CCGGAGACCA GCCCTTCCAT CGTGCTGCTC 
ACGCTGGCGC ACCGGATCGA GGCCGAGCTC GGCACCGCCC TCACACCGCT CGGGCTGACG
GTCAGCAGGC TCGGCCTGCT CGGGCACATC GCCGGCGTGC CCGGCGCCTC GTTCAGCGAC
CTGGCGCGGA TGTCCGGGAT CACCGTCCAG AGCGTCCATA CGGCGGTGAA GGCGCTGTCC
GGCGCCGGGC TCGTCCGTGA CAACACCGCC CGCGCCGGGT CCGCCTCGGC CATCGAGATC
ACGTCCGAGG GCGCGCGTCT CATGCGGGAG GCGATGAAGG CCGTGGCCGG GGTCGACGAG
CGGTTGTTCG GCCCGGACGC CGACCCGATC CAGCGTCAGG TCGCCGACGC CGTACGCGCC
GCGTTCGGGG GCCCTCCCCG GCCCTGA
 
Protein sequence
MTIENPRPGP PETSPSIVLL TLAHRIEAEL GTALTPLGLT VSRLGLLGHI AGVPGASFSD 
LARMSGITVQ SVHTAVKALS GAGLVRDNTA RAGSASAIEI TSEGARLMRE AMKAVAGVDE
RLFGPDADPI QRQVADAVRA AFGGPPRP