| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3471 |
|---|
| Symbol | |
|---|
| ID | 8666759 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3838348 |
|---|
| End bp | 3840354 |
|---|
| Gene Length | 2007 bp |
|---|
| Protein Length | 668 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | ABC-type multidrug transport system ATPase and permease components-like protein |
|---|
| Protein accession | YP_003339150 |
|---|
| Protein GI | 271964954 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0304055 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00154798 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCACGG CGGACCAGCA GGTGCCGGAT CCGGGCGAGG GCGGCCCGGC GGACGCGACG
GGGGGCGGGG AGGCGGACGC GCGGCGGACG CCGGAGGAGG GCCGCGAGCT GCTGCCCGTC
GCGGCCCCCG CCCGGACCCG CGCCGCCGTC CGCGAACTGC TGCGCCCCCA CCGGGGACTG
GCGCTCGGCG GGTTCGCCGT GATGGTCGCG GCGACCGCCG TCGGGCTGCT CACGCAGCCG
CTGCTGGGAC GCATCGTCGA CCTGGTCGCC GACCGGCACC CGGCCGGGGC GCTCACGCTG
CCGGCGGCGC TCCTGGTGCT CGTCGCGCTC ACGCAAGGAG GCGCCACCGC GCTCGGGCTG
TCGCTGATCT CCCGCCTCGG CGAGACCGCG CTCGCGGAGC TGCGCGAGCG GTTCATCGAG
CGGGCCCTGC GGCTGCCCCT GGAGCAGGTG GAGAAGGCCG GCTCGGGCGA CCTCACCGCC
CGGGTCACCG GCGACGTGTC GCAGGTGTCG GAGGCGATAC GCACCGCCCT GCCCGAGCTG
GCCCGCTCCC TGCTGGCCAT CGTGCTGACC CTCGGGGCGC TGGCCGTACT CGACTGGCGG
TTCCTGCTCG CGGCACTGCT CGCGGTGCCG GTCCAGGCGC ACACCGCGCG CTGGTACGTA
CGCAACGCCG TGCCGCTCTA CGCCCGGCAG CGCGTCGCCG CCGGAGCCCA GCAGCAGCAG
CTGCTGGACA CCATCGGCGG CGCCGCCACG GTGCGGGCGT TCCGGCTGGA GGCCGGGCAC
ACCGAGCGGG TCACCCGCCG CTCCCTGTCG GCGGTGGAGC TGACGATGCG CGGGGTACGG
CTGGTGCTGC GGTTCTACAG CCGCCTGCAC CTGGCCGAGT ACACCGGTCT GGCGGCGGTG
CTGGTGGTCG GATTCCTCCT GGTGCGCGAC GGGTCCGCCT CCATCGGCAC CGCGACGGCG
GCGGCACTGT ACTTCCACAG CCTGTTCGGG CCGGTCAACT CCGCGCTCGT GCTGCTCGAC
GACGCCCAGT CGGCCGGCGC GAGCCTCTCC CGCCTGGTCG GGGTCGCCGA CCAGGCGGAG
CCGGAGCGGC AGGAGCAGGG GCGGCCGGAG CAGAGGCGGC CGGAGCAGAG GCGGCCGGAG
CAGAGGCGGC CGGAGCAGGG GCGGCCGGAG CAGGGGCGGC CGGAGCAGGG GCGCGAACAG
CAGCGGGAGC CCGGCGCCCC GCCGGAGGGA GCAGTGACGG TGTCCGGCCT CGGGCACGCC
TACGAGCCCG GCCGGCCGGT GCTGCACGAC GTGGACCTCA CCCTCCGGCC CGGCGAACGC
GTGGCCCTGG TCGGCGCCAG CGGCGCGGGG AAGACCACGC TCGCCAAAAT CATCGCCGGC
ATCCACCACC CGACCACCGG CTCGGTACGG CTGGCCGTCT CCGAGCGGCA CGGGGCCGGC
CGCGCGGTGG CCCTGGTCAC CCAGGAGGTG CACGTCTTCG CCGGGCCCCT CGCCGACGAC
CTGCGGCTGG CCCGGCCCGA CGCCGGCGAC GACGACCTGC GCGAGGCGCT CGCCCGCGTG
GACGCGCTGG CCTGGGCCGA GGCGCTGCCC GACGGCCTGC GGACGATCGT GGGCGAAGGC
GGCCACCGCC TCACCGCCGC GCAGACCCAG CAGCTCGCCC TCGCCCGGCT GGTCCTGGCC
GACCTGCCGA TCGCCGTGCT CGACGAGGCG ACGGCCGAGG CGGGCAGCGC CGGGGCCCGC
ATGCTGGAGA AGGCCACCGA GCGGGCCGTC GAGGGCCGCA CCGCCCTGGT CGTCGCCCAC
CGCCTCGCCC AGGCCGCGAC CGCCGACCGC ATCGTCGTCA TGGACGGCGG CCGGGTCGTG
GAGAGCGGCG GGCACGACGA GCTGCGCGCC GCCGGGGGAC GGTACGCCGC CCTGTGGGGG
GCGTGGTCGG AGATCCGCGA CACCGCTCAC CACCAATCCC CGCACCCGAC GAATCCACCA
TCTGACGGAA AAATGAAGGA CCCCTGA
|
|---|
| Protein sequence | MTTADQQVPD PGEGGPADAT GGGEADARRT PEEGRELLPV AAPARTRAAV RELLRPHRGL
ALGGFAVMVA ATAVGLLTQP LLGRIVDLVA DRHPAGALTL PAALLVLVAL TQGGATALGL
SLISRLGETA LAELRERFIE RALRLPLEQV EKAGSGDLTA RVTGDVSQVS EAIRTALPEL
ARSLLAIVLT LGALAVLDWR FLLAALLAVP VQAHTARWYV RNAVPLYARQ RVAAGAQQQQ
LLDTIGGAAT VRAFRLEAGH TERVTRRSLS AVELTMRGVR LVLRFYSRLH LAEYTGLAAV
LVVGFLLVRD GSASIGTATA AALYFHSLFG PVNSALVLLD DAQSAGASLS RLVGVADQAE
PERQEQGRPE QRRPEQRRPE QRRPEQGRPE QGRPEQGREQ QREPGAPPEG AVTVSGLGHA
YEPGRPVLHD VDLTLRPGER VALVGASGAG KTTLAKIIAG IHHPTTGSVR LAVSERHGAG
RAVALVTQEV HVFAGPLADD LRLARPDAGD DDLREALARV DALAWAEALP DGLRTIVGEG
GHRLTAAQTQ QLALARLVLA DLPIAVLDEA TAEAGSAGAR MLEKATERAV EGRTALVVAH
RLAQAATADR IVVMDGGRVV ESGGHDELRA AGGRYAALWG AWSEIRDTAH HQSPHPTNPP
SDGKMKDP
|
|---|
| |