Gene Sros_3466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3466 
Symbol 
ID8666754 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3812076 
End bp3813182 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC Fe+3-siderophore transporter, inner membrane subunit 
Protein accessionYP_003339145 
Protein GI271964949 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00535674 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGTAC CGTCGCCCCT GCGGCCCCGG AAGACCCCGC ACCGCACCGG CGGGGAGATC 
CCCGCCTCTT CCCACCGCAC CTTCCGGCTG GCCGCCCCGC CCGTCTCCGG GATCCTGCGG
CCACGGCTGA TCACGGTGTG CGCCGCGCTC TCCGTCGCCA CCTTCCTCGT CTTCTGCTGG
GGCGTCTCGG TCGGCGACTA CCCGATCCGC CTGGTCGATG TGATGAAGGC GCTGGTCGGC
TCCGGCGACC CCGGGACCCT GCTGGTCGTC CGGGAGCTGC GGCTGCCGCG CGCCGTGGTC
GGGCTGCTGG TCGGCGTCGC CTTCGCCGTC TCCGGCGCGC TGTTCCAGAC CATGACCCGC
AACCCGCTGG GCAGCCCGGA CATGATCGGC CTCACCGAGG GCGCCGGCAC CGCCGTGGTC
GCCGGCATCG TGCTCGGCTG GGACGGCGGC CTGGGCACCC AGACGCTCGG GCTGCTCGGC
GCGCTGGCCA CCGCCCTGCT CGTCTACATG CTGGCCTGGA GGCGCGGCAC CACCGGCTAC
CGGATCATCC TGGTGGGCAT CGGGGTGGCA TGGGTCTGCA CCAGCGCCAC TGACTATCTG
GTGGCCAGGG GCGGGCGGTT CCAGGCGCAG GCCGCGCTCG GCTGGCTGGT GGGCAATCTC
AACGGCCGCA CCTGGGAGCA GGCCGTCCCG CTCGCCGCCG TCATGGCGCT GCTGGTTCCG
GCGGCACTGG TGCTGGGCCG CCTGATGCGC ACGCTCCAGC TCGGCGACGA CATCGCCGCC
GGTCTCGGCA CCCGCGTGCA GCCGGTCCGC TTCGCCCTGC TGCTCACCGG TGTCGGGCTG
GTCGCCTTCG GCACCGCGGC GGCGGGCCCG GTCGCCTTCG TGGCGCTCGC CGCGCCGCAG
ATCGCCCAGC GGCTGGCCGG CACCGCCTGG CCGCCGCCGA TCGCCTCGGG GCTGACCGGA
GCCCTGGTCA TCCTGTCCAG CGACCTCATC GCGCGCAAGC TGATCTCCGG CACGGAACTG
CCGGTCGGGA TCGTCACCGG CGTCCTCGGC GCGCCGGTCC TGCTCTGGCT ACTCATCCGC
GCCAACCGCG CGGGCTCAGG AGGGTGA
 
Protein sequence
MNVPSPLRPR KTPHRTGGEI PASSHRTFRL AAPPVSGILR PRLITVCAAL SVATFLVFCW 
GVSVGDYPIR LVDVMKALVG SGDPGTLLVV RELRLPRAVV GLLVGVAFAV SGALFQTMTR
NPLGSPDMIG LTEGAGTAVV AGIVLGWDGG LGTQTLGLLG ALATALLVYM LAWRRGTTGY
RIILVGIGVA WVCTSATDYL VARGGRFQAQ AALGWLVGNL NGRTWEQAVP LAAVMALLVP
AALVLGRLMR TLQLGDDIAA GLGTRVQPVR FALLLTGVGL VAFGTAAAGP VAFVALAAPQ
IAQRLAGTAW PPPIASGLTG ALVILSSDLI ARKLISGTEL PVGIVTGVLG APVLLWLLIR
ANRAGSGG