Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3458 |
Symbol | |
ID | 8666746 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3805279 |
End bp | 3806199 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | hydrolase protein |
Protein accession | YP_003339137 |
Protein GI | 271964941 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.326966 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00447624 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCACCG TCCCGCCGGC GTCGAGCCCG TTCCGGGCCG CCCCCGAGAA GATCGTCCGC GCCAACGGCG TCGACCTGGC CACGCAGGCC TTCGGCGACC CGGCCGCGCC CCCGATCCTG CTCGTATCCG GGGCGGAAGC CTCCATGGAC TGGTGGGACG ACGACTTCGC CGCCCGGCTC GCCGCGACCG GCCGGCACGT CATCCGTTAC GACACCCGCG ACACCGGCGG CTCCACCACG TTCCCGGTCG GCGCGCCCAC GTACACGCAG GACGACCTGC TCGCCGACGC GCTCGGCGTG CTCGACGGGT ACGGCCTCGC CGCGGCACAC ATCGTCGGCG TCTCCATGGG CGGCGGGCTC GCGCAGTGCC TCGCCGTGCG GCATCCCGGG CGGGTGCTGA CGCTGACCCT GATCTCCACC AGCCCCGGTG GCCCCGGCGG CCCGGAGAAC CCCGACCTTC CCCCGATGAG CGAGAAACTG GCGAAGATGT TCGCCGACCC CGCGCCCGGC CCGGACTGGG CGGACCGCGA CGCGGTGATC GGCTACTTCC TCGACGCCGA ACGCGTCTTC GCCGGCACGA TCCCCGTCGA CGAGGAGCGG GTCCGCCGCA CCGCGGGCCG CGCCTTCGAC CGCAGTCCGG TCCCGGCCGC CGCGTCCAAC CACTGGATGA TCGAGGGCGG CGAGCCGGTC CGGTCCCGCC TCGGCGAGAT CACCGCGCCG ACCCTGGTGC TGCACGGCAC GGCCGACCCG CTCTTCCCGT ACGGCCATGC CGAGGCCCTG GCCCGCGAGA TCCCCGGCGC CACGCTGATC CCGCTACCCG GGGTGGGCCA CCAGATGCCG CCGTACGAGG TCTGGGACAC CGTCATCCCC GCGATCGGCG CGCACACCGG TCACGGCCAG GGGTTCGTGG TGACGCTGTA G
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Protein sequence | MSTVPPASSP FRAAPEKIVR ANGVDLATQA FGDPAAPPIL LVSGAEASMD WWDDDFAARL AATGRHVIRY DTRDTGGSTT FPVGAPTYTQ DDLLADALGV LDGYGLAAAH IVGVSMGGGL AQCLAVRHPG RVLTLTLIST SPGGPGGPEN PDLPPMSEKL AKMFADPAPG PDWADRDAVI GYFLDAERVF AGTIPVDEER VRRTAGRAFD RSPVPAAASN HWMIEGGEPV RSRLGEITAP TLVLHGTADP LFPYGHAEAL AREIPGATLI PLPGVGHQMP PYEVWDTVIP AIGAHTGHGQ GFVVTL
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