Gene Sros_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3454 
Symbol 
ID8666742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3797807 
End bp3799021 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content71% 
IMG OID 
Productacyl-CoA dehydrogenase-like protein 
Protein accessionYP_003339133 
Protein GI271964937 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.419205 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0258575 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA CCGGCTTCTG CCCGGAGCTG AGCGACGACG TGCGAGAGGT GCGCGACTGG 
GTGCACGATT TCGCCCGCTC CGTCGTCCGC CCGGCCGGCG CCGAATGGGA CGAGCGCGAG
GAGACGCCCT GGCCGGTCAT CCAGGAGGCC GCCAAGATCG GGCTCTACTC GCTCGACTTC
TTCGCCCAGC AGTGGTTCGA ACCGAGCGGC CTGGGCCTGA CGGTGGCCTT CGAGGAGCTC
TTCTGGGGAG ACGCGGGGAT CGGCCTGTCC ATCGTCGGCA CCGGCCTCGC CGCCGCGGCC
CTGTCCGCGG GCGGCACACC CGAGCAGATG GGGGAGTGGC TGCCGCAGAT GTTCGGCACC
CCCGAGGACG TCAGGCTCGG CGCGTTCTGC GCCTCCGAAC CCGACGCCGG CTCCGACGTG
GGGGCCATCC GCACCCGGGC CGTCCCCTCC GGCGACGACT GGATCCTCGA CGGCGTGAAG
ACCTGGGCCA CCAACGGCGG CATCGCCGAC GTCCACATCG TCGTCGCCTC GGTGGACCCC
TCGCTGGGCA CCCGGGGCCA GGCCTCCTTC ATCGTCCCTC CCGGCACGGC CGGGCTCGCG
ATGGGGCGCA AGTTCAGGAA GCACGGCATC CGCGCCTCCC ACACCGCCGA GGTGATCCTC
GACAACGTGC GTGTGCCCGG CTCGTGCCTG CTCGGCGGCA GGGAGAAGCT CGACGCCAGG
CTGGCGCGCG TCCGCTCCGG CGAGCGTGCC GGCGAGCAGG CGGCGATGCG GACCTTCGAG
ACCACCCGCC CGTCGGTGGC GGCGATGGCG GTGGGCATCG CCCGAGCGGG ATACGAGTAC
GCCCGTGACT ACGCCCGGGA ACGCGAGCAG TTCGGCCGCA GGATCGGAGA GAACCAGGCG
ATCGCCTTCC TGCTGGCCGA CATGGCCACC CGCGTCGACG TTGCCCGCCT GATGACCTGG
CGTGCGGCCT GGATGGCCCG TAACAACCGC GCCTTCGGCC AGGCCGAGGG CTCGATGTGC
AAACTGGTGG CGGGCGAGGC CGCGGTCTGG GTCACCGAGC AGGCCATCCA GATCCTCGGC
GGAGCCGGCT ACACCCGCGA ACACCCGGTC GAACGCTTCC ACCGGGACGC CAAGATCTTC
ACCATCTTCG AGGGGACGTC GGAGATCCAA CGGTTGATCA TCGGCCGGGC TGTCACGGGG
CTGCCGGTGC GGTGA
 
Protein sequence
MSETGFCPEL SDDVREVRDW VHDFARSVVR PAGAEWDERE ETPWPVIQEA AKIGLYSLDF 
FAQQWFEPSG LGLTVAFEEL FWGDAGIGLS IVGTGLAAAA LSAGGTPEQM GEWLPQMFGT
PEDVRLGAFC ASEPDAGSDV GAIRTRAVPS GDDWILDGVK TWATNGGIAD VHIVVASVDP
SLGTRGQASF IVPPGTAGLA MGRKFRKHGI RASHTAEVIL DNVRVPGSCL LGGREKLDAR
LARVRSGERA GEQAAMRTFE TTRPSVAAMA VGIARAGYEY ARDYAREREQ FGRRIGENQA
IAFLLADMAT RVDVARLMTW RAAWMARNNR AFGQAEGSMC KLVAGEAAVW VTEQAIQILG
GAGYTREHPV ERFHRDAKIF TIFEGTSEIQ RLIIGRAVTG LPVR