Gene Sros_3424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3424 
Symbol 
ID8666712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3765251 
End bp3766396 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content73% 
IMG OID 
ProductOuter membrane lipoprotein-sorting protein-like protein 
Protein accessionYP_003339104 
Protein GI271964908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.272957 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGC AGACGAGACG GGGCCGTGCG GTGAGGTGGG GCGTGCCGAT CGCCACGATC 
GCGCTGGTCG CCGGGGCCAT CGGCGCGGGT CCGGTGATCG CGGCGGTCCA GGGGGATCCG
GTGCTGCCCG AGCGCACCGC CGCGCAGTTG CTGGCCGACG CCGTCCAGGC CACCGAGTCC
GGCCTGAAGC CCATGTCGGG CACCGTGATG CAGACCGCCT CCCTCGGCCT ACCGGGGCTG
CCGGAGGTGG CGGGGATGGG CGGCACGTCG CCCGCGGCCC TGCTGGCGGG CTCGCACGAG
CTCAAGGTCT GGTACGGCGG CGAGGACCGG TTCCGGTTCG CCCTCCCCGG GCGGATGAGC
GAGACCGACC TGATCGTCAA CGGCGACCAG GCCTGGCTGT GGGAGAGCGC GACCAACAAG
GCCACCCGGA TCAAGGGCGC CGGCCAGGCG GGGCCGGAGC ATGACAGGGC CCTGCCCGCG
GCGACCACCC CGCAGCAGGT CGCCGACGAG ATGCTGAAGC GGGCCGACGC CGCCACCGCG
GTCAGCGTGA GCAACACCGA GAAGGTCGCC GGCCGGTCGG CCTACCAGCT CGTCCTGACG
CCCAGGGACG GTTCCTCCCT GGTCAAGGAG GTCAAGCTGG CGCTCGACGG TGAGACCTTC
GTCCCGCTGC GGGTCCAGGT CTACGCCAAG AGCGCGGCCG AACCGGCCTT CGAGGTCGGC
TTCACCTCGG TGACGTTCAC CCCGCCCGCC CCGGACAACT TCACCTTCAC CCCGCCCGCG
GGCGCGAAGG TGGAGGAGAA GTCGCTCGCC GACCTGGGGC GCCGTCCGGA GGCCGGGCAG
GAGCGGGCCG AGGCGCTGAA GGGCGAGATC ACGACCGTGG GCGAGGGCTG GACCACGGTC
GCGGTGCTCC CGTTCTCCGC GCAGGACCTC GCGGGTCCGG CCCAGCAGGG CGGCCGGTCC
GGCGGGCAGG ACACGACCGC GGTCGCCGAC GCCCTGCTGA AGTCGGCCAA GCAGGTCAGC
GGGGCGTGGG GCAGCGGCAA GGTCATCCAG ACCAAGCTGG TCTCCGCGCT GCTGACCGAC
GACGGCCGCC TGCTGGTCGG CGCTGTCACC CCCGAGAAGC TGACCGAGGC GGCCGGGCAG
AGATGA
 
Protein sequence
MSEQTRRGRA VRWGVPIATI ALVAGAIGAG PVIAAVQGDP VLPERTAAQL LADAVQATES 
GLKPMSGTVM QTASLGLPGL PEVAGMGGTS PAALLAGSHE LKVWYGGEDR FRFALPGRMS
ETDLIVNGDQ AWLWESATNK ATRIKGAGQA GPEHDRALPA ATTPQQVADE MLKRADAATA
VSVSNTEKVA GRSAYQLVLT PRDGSSLVKE VKLALDGETF VPLRVQVYAK SAAEPAFEVG
FTSVTFTPPA PDNFTFTPPA GAKVEEKSLA DLGRRPEAGQ ERAEALKGEI TTVGEGWTTV
AVLPFSAQDL AGPAQQGGRS GGQDTTAVAD ALLKSAKQVS GAWGSGKVIQ TKLVSALLTD
DGRLLVGAVT PEKLTEAAGQ R