Gene Sros_3420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3420 
Symbol 
ID8666708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3761544 
End bp3762182 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content68% 
IMG OID 
Productputative transcriptional regulator, TetR family 
Protein accessionYP_003339100 
Protein GI271964904 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.908094 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.385629 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG CTGATGGCGG CCAGCGGGAG CTGATCCTGC GGGTCGCGAC CCGACTGTTC 
GCCGCCCTGG GCTACGACGC GACCTCCATC AGCCAGATCG CCGAGGCCGC CGGGCTGGAC
GTCGCCACGA TCACCCAGCA GGCCGGCGGC AAGCGCGAGC TGTATCTCAC GGTCATGGAC
TGGGTGCACG AGACCGAGCT GGCCTCCCTG CACAAGGCGG TCGAGGGCGT TCCCGTGACG
AGCCCCGAAC AGGCGAACGC GCTGGTGTGC CGGATCATCG ACCAGTACCT CGACCTGTGC
GTGGCCCATC CCGAGATCCC GGCCCTGTGG ATGCACCGGT GGCTCTCCGA TGCCAGCGAC
GTCACCGAAC TGGAGCTGCG CTACACCCGG CCGATGGGCA AACTCGTCAA ATCCGCGCTC
GCCCCCGCGA TCGCCGGCGG ATACATCGAC CCCGACGTCG ACATGGAATA CCTCCTGTGG
TCGATGCTCT GGTGCGTGAA CGGCTTCTCC CAGAGCGGGG TGCTCGACGA GCACGGCAAT
CGCCGGCACA TGGACGACCC CGAGGTCCTG CGCAGGTTCC GCGCCCTCCT TCACCGGATG
ATCCACCGCA CCGTCGCCTT CCCCGGAGAC CCTCCTTGA
 
Protein sequence
MTSADGGQRE LILRVATRLF AALGYDATSI SQIAEAAGLD VATITQQAGG KRELYLTVMD 
WVHETELASL HKAVEGVPVT SPEQANALVC RIIDQYLDLC VAHPEIPALW MHRWLSDASD
VTELELRYTR PMGKLVKSAL APAIAGGYID PDVDMEYLLW SMLWCVNGFS QSGVLDEHGN
RRHMDDPEVL RRFRALLHRM IHRTVAFPGD PP