Gene Sros_3419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3419 
Symbol 
ID8666707 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3760177 
End bp3761547 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content75% 
IMG OID 
ProductNa+/melibiose symporter and related transporter- like protein 
Protein accessionYP_003339099 
Protein GI271964903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.860481 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCTTGG AACACTCCCC CTCGCGGCCC CTGGCGGCCG CACCCCCGCT CAACCGCGGG 
CGACTGCTCG GCTACGCCCT GGGCTCGGTC GGCACCGGGA TCTTCTCCGC GGTCCCCGGC
CTGCTCCTGC TGTTCTACCT GACCGACGTC CTCGGGGTCT CCGCGGCCGT GGCGGGGGCC
GTGCTGGTCG CCCCCAAGGC CTGGGACGTC CTGCTCAACC CGGTCGTCGG CGCGGTCAGC
GACCGCGAGG CCGTGCGGAC CGGCCGGCGC ACCCGGCTGC TGTCGCTCGG CTCGCTCGCC
CTGCCGGTGG CCTTCGCCGC TATGTTCGCC GTGCCGGGCC AGACGCCCGG CGTGGTCTGG
GCGGGGGGCG CGTTCCTGCT CGCCGCGTCG GCGTTCGCCT GCTTCCAGGT GCCCTACGTG
GCGCTGCCCG CGGAGATGGC CGACGGCACG GCGGAACGTA CCCGGATCAT GTCCTGGCGG
ATCGTCTGCC TGACCCTGGG CATCCTGGTC GCCGGAGGGC TGGCTCCGGA GATCGTGGGC
CTGGGCGGCG GCGGCCGGGC CGGATACGCC GTGATGGGCG TGGCGGTCGG CGCGGTGATG
GCCGCGGCTC TGCTGGCCGC CACCCTGTCC ACCCGCTGGG TCGTCTCCCG CCCGGGTCCC
CGGCAGCTCG GGCTGGTGGC CGCCTTCCGC ACCGCCCGGG GCAACCGGCC GTTCTTCGCC
CTGCTGGCCG CGTTCGTCAC CCAGTCCCTG GGGGTGGCGG TGATGCTGGC GGGCGCGCCG
TACGTGGCGG TCTACCGGCT GGGCGACTAC GGGCTGACCT CGCTCATGTT CGTGTGCATG
GTGGGGCCGA GCGCGCTCGC CGTACCGCTG TGGACGCGGG CGGCGCGCCG GTTCGGCATG
GTGGCCTGCT ACCTCGTGGC CGTGGCGGGG TTCGCGGCGG CGGCGCTCGC GCTCATCCCG
GTGGCCGGCT CGGCCGGGGT CGCGGGCACG CTCCTGCTCA CCGGCCTGAT CGGCGTCTGC
TACGCCGCTC TGCAACTGCT GCCGCTGTCG CTGCTCCCGG AGACCGTGCA CGCCGACGCC
GCCCGCACCG GGCACGCCCA GTCGGGCGCC TTCACCGGCC TGTGGACCGC CGGGGAGACG
GCGGGCATGG CGGTCGGCCC GGGACTGTTC GCCCTGGTGC TGGCCGCGAG CTCGTTCGCC
TCCGGGTCGT TCGACGCCCC CGCCGTACAG CCCGGCTCGG CCCTGACCGG CCTGCTGCTC
GGCTTCACCG CCCTCCCCGC GGCCCTCATG CTGCTCAGCC TCCCTCTCGT CATCGCCTAT
CACCGGCTCG CACGGGCCGT ATCCCCCAAG GAGATTCATG AGCCTGCCTG A
 
Protein sequence
MTLEHSPSRP LAAAPPLNRG RLLGYALGSV GTGIFSAVPG LLLLFYLTDV LGVSAAVAGA 
VLVAPKAWDV LLNPVVGAVS DREAVRTGRR TRLLSLGSLA LPVAFAAMFA VPGQTPGVVW
AGGAFLLAAS AFACFQVPYV ALPAEMADGT AERTRIMSWR IVCLTLGILV AGGLAPEIVG
LGGGGRAGYA VMGVAVGAVM AAALLAATLS TRWVVSRPGP RQLGLVAAFR TARGNRPFFA
LLAAFVTQSL GVAVMLAGAP YVAVYRLGDY GLTSLMFVCM VGPSALAVPL WTRAARRFGM
VACYLVAVAG FAAAALALIP VAGSAGVAGT LLLTGLIGVC YAALQLLPLS LLPETVHADA
ARTGHAQSGA FTGLWTAGET AGMAVGPGLF ALVLAASSFA SGSFDAPAVQ PGSALTGLLL
GFTALPAALM LLSLPLVIAY HRLARAVSPK EIHEPA