Gene Sros_3416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3416 
Symbol 
ID8666704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3756870 
End bp3757736 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content71% 
IMG OID 
ProductDNA-binding transcriptional regulator CynR 
Protein accessionYP_003339096 
Protein GI271964900 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.144678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.641219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCTGC AGCAGCTCCG CTATGTGGTC GCGACAGCGG AGCACCGCAC CATGACCGAT 
GCGGCCAGGT CGCTGTACAT CGCACAACCT GCGCTTTCCC GTGCGATCAG AGACCTCGAA
CGAGAGCTGG GGATGACGTT GTTCGCCCGT TCCGGGCGGG GCGTGGTCGT CACGGCGCAG
GGGCGCCGGG TGGTCAAGCT CGCCAAGGAG GCGCTCGACG CTGTCCGCGA GATCGAGGCA
CTGTCCAGCC ATGGCCATTC CGAGGCGGAA CTGCGTATCG CCTCCACCCC CAGCCTTGAG
CCGGGGCTGG CCGGACGCCT CCTTCCCGCC TACAGTGCCG AGCACCCCGG GGTGCGCGTG
CACATCGTCC GCTGTGACGG ACGGGACGGC GTGGTGAACG CCATCAGGGA CCAGCGGGCC
GATCTCGGCC TGACGGACCT GCCCGTCCCC GCCGACCTCG TCAGCCACCC GCTGGAGCGT
CAGGAGATCG TGCTGATCTC CCCGCCCGGC ATGGACCTGC CCAACCCGGT GCCGATGAGC
AGGCTCAACG GCATGCGGCT GGTCCTGCCG ATCCCCGGCA GCGCCCGGCG CAGGGAGTTC
GACGCGCTGT TCGCCAAGTA CGGCGTCACC CCGGTGCCGA CCGTGCAGCT GGACGAGCGC
GGCAACTGGC TGAACACGGT CCGTTCGGGC GCGGCCTCCC TGCTCTGGTA CCGGGGGATG
GCCGAGCAGG CCACCCGGGC CGGGCTGGTG GTCCGCCCCC TCGATCCCTC GGTCCGCCGG
GTGATCGCCA TCGTCCACGC GCGACGGCGG CTGCCCGCCA TCGCCCAGGA GTTCCTGTCG
GTGGCCGAAG GTGGGTCGGC CGCCTAG
 
Protein sequence
MNLQQLRYVV ATAEHRTMTD AARSLYIAQP ALSRAIRDLE RELGMTLFAR SGRGVVVTAQ 
GRRVVKLAKE ALDAVREIEA LSSHGHSEAE LRIASTPSLE PGLAGRLLPA YSAEHPGVRV
HIVRCDGRDG VVNAIRDQRA DLGLTDLPVP ADLVSHPLER QEIVLISPPG MDLPNPVPMS
RLNGMRLVLP IPGSARRREF DALFAKYGVT PVPTVQLDER GNWLNTVRSG AASLLWYRGM
AEQATRAGLV VRPLDPSVRR VIAIVHARRR LPAIAQEFLS VAEGGSAA