Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3416 |
Symbol | |
ID | 8666704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3756870 |
End bp | 3757736 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | DNA-binding transcriptional regulator CynR |
Protein accession | YP_003339096 |
Protein GI | 271964900 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.144678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.641219 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCTGC AGCAGCTCCG CTATGTGGTC GCGACAGCGG AGCACCGCAC CATGACCGAT GCGGCCAGGT CGCTGTACAT CGCACAACCT GCGCTTTCCC GTGCGATCAG AGACCTCGAA CGAGAGCTGG GGATGACGTT GTTCGCCCGT TCCGGGCGGG GCGTGGTCGT CACGGCGCAG GGGCGCCGGG TGGTCAAGCT CGCCAAGGAG GCGCTCGACG CTGTCCGCGA GATCGAGGCA CTGTCCAGCC ATGGCCATTC CGAGGCGGAA CTGCGTATCG CCTCCACCCC CAGCCTTGAG CCGGGGCTGG CCGGACGCCT CCTTCCCGCC TACAGTGCCG AGCACCCCGG GGTGCGCGTG CACATCGTCC GCTGTGACGG ACGGGACGGC GTGGTGAACG CCATCAGGGA CCAGCGGGCC GATCTCGGCC TGACGGACCT GCCCGTCCCC GCCGACCTCG TCAGCCACCC GCTGGAGCGT CAGGAGATCG TGCTGATCTC CCCGCCCGGC ATGGACCTGC CCAACCCGGT GCCGATGAGC AGGCTCAACG GCATGCGGCT GGTCCTGCCG ATCCCCGGCA GCGCCCGGCG CAGGGAGTTC GACGCGCTGT TCGCCAAGTA CGGCGTCACC CCGGTGCCGA CCGTGCAGCT GGACGAGCGC GGCAACTGGC TGAACACGGT CCGTTCGGGC GCGGCCTCCC TGCTCTGGTA CCGGGGGATG GCCGAGCAGG CCACCCGGGC CGGGCTGGTG GTCCGCCCCC TCGATCCCTC GGTCCGCCGG GTGATCGCCA TCGTCCACGC GCGACGGCGG CTGCCCGCCA TCGCCCAGGA GTTCCTGTCG GTGGCCGAAG GTGGGTCGGC CGCCTAG
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Protein sequence | MNLQQLRYVV ATAEHRTMTD AARSLYIAQP ALSRAIRDLE RELGMTLFAR SGRGVVVTAQ GRRVVKLAKE ALDAVREIEA LSSHGHSEAE LRIASTPSLE PGLAGRLLPA YSAEHPGVRV HIVRCDGRDG VVNAIRDQRA DLGLTDLPVP ADLVSHPLER QEIVLISPPG MDLPNPVPMS RLNGMRLVLP IPGSARRREF DALFAKYGVT PVPTVQLDER GNWLNTVRSG AASLLWYRGM AEQATRAGLV VRPLDPSVRR VIAIVHARRR LPAIAQEFLS VAEGGSAA
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