Gene Sros_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3407 
Symbol 
ID8666695 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3746122 
End bp3746862 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content73% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003339087 
Protein GI271964891 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.23251 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.480251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGA CATCGGATCT GAGCAAGTCC TTCCCGGGCG GCGTCGAGGC CGTCCGGGGG 
GTGGACCTGG CCGTCGAGGC CGGGGAGATC GTGGGCTTCC TCGGCCCCAA CGGCGCGGGG
AAGACGACCA CCATGCGCAT GCTGACCACG CTGCTCCGCC CCACCGGCGG CACCGCCACG
GTCGCCGGGC ACGACCTGCT CGCCGATCCC GAGGGCGTAC GGCGGCGCAT CGGCTACGTG
TCCCAGAACG GCGGGCTCAG CCCGGCCGAC CCGGTGGGAG AGGCGCTCGA ACTCCACGCC
ATGCTGTACG GCATGCGCCC CGCCGAGGCG CGCGAGCGGG TCCGCGAGGT GCTCGACGAC
CTCGACCTCA CCGGTCTGGA GACCCGTCCG GGCGGTGCGC TCTCCGGCGG CCAGCGCCGC
CGGTTCGACC TCGGGTTCGG CCTGGTCCAC GGCCCGTCGC TGCTCTTCCT CGACGAGCCC
ACCACCGGCC TCGACCCGCA GAGCCGGGCC AACCTCTGGG ACCACGTCAG GCGCCTGCGG
GAGGAGCGCG GACTCACGGT CTTCCTGACC ACCCACTACC TCGACGAGGC GGACGCGCTC
GCCGACCGGC TGTTCGTCAT CGACCACGGC GTGATCGTCG CCGAGGGCAC CCCCGCCGAG
CTCAAGGGCG GCTCCGGCAC CCTCGACGAC GTCTTCCTGT CCATCACCGG CCGCTCCCTG
AGGGAGGAGC CGGCCCGATG A
 
Protein sequence
MIKTSDLSKS FPGGVEAVRG VDLAVEAGEI VGFLGPNGAG KTTTMRMLTT LLRPTGGTAT 
VAGHDLLADP EGVRRRIGYV SQNGGLSPAD PVGEALELHA MLYGMRPAEA RERVREVLDD
LDLTGLETRP GGALSGGQRR RFDLGFGLVH GPSLLFLDEP TTGLDPQSRA NLWDHVRRLR
EERGLTVFLT THYLDEADAL ADRLFVIDHG VIVAEGTPAE LKGGSGTLDD VFLSITGRSL
REEPAR