Gene Sros_3402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3402 
Symbol 
ID8666690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3742173 
End bp3742901 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339082 
Protein GI271964886 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0197129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.301913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCAGC CCGTCACCGC TCCGCCGGTC CCTGAGCGCG TCCGCACGCT GGCCGCCACC 
GCCGCCCCCA CCCACGTGTC CCTCGCCGGT ACGGCCCTGC CCGCCATGCC CGCCAGGGGT
GGCGTGGACG GCGCGGGGCG CCCGGTGCTG CTGGTGCTGC CGGGGGACCC GCTCCACGAG
GTGCGCGACG AACCGGTGGT GACCGTCGAC CTGACCGCGA CCCGCTCCCT GGGCGGGCTT
GAACTCTCGC GCGGCCTGCT CAAGGTGCAG GGCTGGGCGC AGGCCGTACC GGCCGCCGAG
GCGCGGGAGA CCGCGGTGGC GATCGCCGAG CGCTGCCCGG ACGAGGCCCT GTTCGACGCC
CTGGAACGCG CCGACGGCCC CCGGCTGCTC CGCGTCGACG TCGGCCAGGT GATCTATCTC
ACCGGCCCCG AATCAGGCGT CCTGGATGCC GAGGAGTATC TCGACGCCGA CCCCGACCCG
CTGATGAGCG AGGCCGAACG CATGCTCCAC CATGTCAACT CCACCCACCG GGGGCAGCTG
GAGACCGCGC TGCGCTCGCT GCTCGCCGCC CCGGTCTCCG AGGCGTGGCT CTGGGAGCTC
GACCGCTTCG GCGCGACCGT CCGCTCCGGC ATCGACAACC CCACCCTGGT CCGCCTGCCC
TGGCCCACCC CCATCACCGA CGCCGGCTCC CTGGAGCGGG CCCTGCGCTG CCTGCTCTGC
CACCACTGA
 
Protein sequence
MQQPVTAPPV PERVRTLAAT AAPTHVSLAG TALPAMPARG GVDGAGRPVL LVLPGDPLHE 
VRDEPVVTVD LTATRSLGGL ELSRGLLKVQ GWAQAVPAAE ARETAVAIAE RCPDEALFDA
LERADGPRLL RVDVGQVIYL TGPESGVLDA EEYLDADPDP LMSEAERMLH HVNSTHRGQL
ETALRSLLAA PVSEAWLWEL DRFGATVRSG IDNPTLVRLP WPTPITDAGS LERALRCLLC
HH