Gene Sros_3369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3369 
Symbol 
ID8666657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3699427 
End bp3700599 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content75% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339051 
Protein GI271964855 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000644747 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.359309 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACATCG ACAACGAGCT GCTCCCCGCG TACGCACGCG GCTGCGCCGT CCTGGGATCG 
GGCGGCGGCG GGTCGGTGTC GATGATGCGC GCGGTGGCCG CCCAGGCGCT GGAGGAGCAC
GGCCCGGTCC GCGTCATCCA GCCGGAGGAG CTGGCCCCAG GCGCTCTCGT CATGCCCTGC
GGCAGCGTGG GCACCTCCGC GGTGCAGGTC GAACGGATCG GCGGCCGGGG CGAACCGGCC
TACCTGCGGG AACAGGTCGA GAAGCTGCAC GGCTCCCGCG TCGAGGCACT GATGCCCAGC
GAGATCGGCG GCGCCAACGG ATGCGTCGCC GTGGCGTGGG CCGCCTACCT CGGGCTGCCG
CTGGTGGACG CCGACGGCAT GGGCCGGGCC TTCCCCCGGA TGGACCAGAC CGCGATGGAG
CTGCACGGGA TCAGTCCCAC GCCCGCCGTG CTCTGCGACG AGCGCGGCCG GACCGTGGTG
ATCGACAACG TCGACGGCCG CTGGCTGGAG CGCCTGGCGC GGGTCGCGCT GGAGGCGTTC
GGCGGGCAGA TGGCCTCCAG CGAGTACGTG CTGCGCGCCG CCCAGGTCCG CGCCTCCACC
GTCACCGGCT CGATCACCCG CGCGGCCGGG CTCGGCGAGA ACCTCCCCGC CCCGCTGCTC
ACCGGGAAGG TCGCCACGGT GGAGGGCGGC TCGATCCTCG TCGAGGGGCT GGGTGCGGAC
GGCGGACGGC TCATCCGGAT CGAGGCGCAG AGCGAATACC TCGCGGTCTT CGAGGACGGC
GACCTGCTGG CCGCCGTGCC GGACATCATC GCGCTGCTGG ACACCAGGAG CGGGGACGCC
GTCCAGGTCG AGCAGCTCCG GTACGGCCTG CGCGTCGGCG TCGTGCGGCT GGAGTGCGAC
CCCGTGTGGC GGACCCCCGC CGGCCTCCGC CTCGGCGGAC CCGAGGCCTT CGGACTCTCC
GGACTCCCCG GGCCGTCCGG GCGGTTCCCC GGACTCGCCG GCCTCACCGC CCCCGGACTC
TCCCGGCCGT CCGAGCCGCT CCCCGACCCC TCCCGGACAT CCGAGCCGCT CCCCGACCCC
TCCCGGACAT CCGAGCCGCT CCCCGACCCC TCCCGGCCGT CCGGGCGGCT CTCCGGGGCG
CCCCGGCCCT GCGGACCGGA GGCGGAGAAG TGA
 
Protein sequence
MDIDNELLPA YARGCAVLGS GGGGSVSMMR AVAAQALEEH GPVRVIQPEE LAPGALVMPC 
GSVGTSAVQV ERIGGRGEPA YLREQVEKLH GSRVEALMPS EIGGANGCVA VAWAAYLGLP
LVDADGMGRA FPRMDQTAME LHGISPTPAV LCDERGRTVV IDNVDGRWLE RLARVALEAF
GGQMASSEYV LRAAQVRAST VTGSITRAAG LGENLPAPLL TGKVATVEGG SILVEGLGAD
GGRLIRIEAQ SEYLAVFEDG DLLAAVPDII ALLDTRSGDA VQVEQLRYGL RVGVVRLECD
PVWRTPAGLR LGGPEAFGLS GLPGPSGRFP GLAGLTAPGL SRPSEPLPDP SRTSEPLPDP
SRTSEPLPDP SRPSGRLSGA PRPCGPEAEK