Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3353 |
Symbol | |
ID | 8666641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3680286 |
End bp | 3681737 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | major facilitator superfamily transporter |
Protein accession | YP_003339035 |
Protein GI | 271964839 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.379633 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00165452 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGGGGCGG CGCAGGAGCA GACCATCCGG ACGCTCATCC CGGCGCGGAT CGACCGCATG CCCTGGTCGC GTTTCCACAC CAGGATGGTG GCCGCGCTCG GGGTGGCCTG GGTGCTCGAC GGCATGGAGA TCACGATCGC CAGCGCCGTC GGCGACGTCC TGCGGGCGCC GGAGACGCTC GGACTGACCT CCACCGAGGT GGGCTTCGCC GCGACCGTCT ACCTGCTCGG CCAGGTGACG GGCGCGCTGG TGTTCGGCCG GCTGTCGGAC AGGCTGGGGC GGCGCAAGCT GTTCATCTTC ACGCTCGGGG TCTATCTCGT CGCCAACGGT CTCACCGCGC TCTCGTTCGA CTACTGGTGG CTGCTGCTGT TCCGGTTCAT CGCCGGGACG GGCATCGGCG GTGAGTACTC GGCGATCCAC TCGGCCATCG ACGAGCTCAT CCCCGCCCGG TACCGCGGTC GGATCGACCT GGCGGTCAGC GGCACCTACT GGCTGGGCGC GATGATCGGC ACCGCCTCCA CCTTCATCCT GCTCAACCCC GACCTGCTCC CGGTGAACGT GGGCTGGCGG CTCGGCCTGC TCATCGGCCC GCTGCTCGGC CTGGCGATCT GGGGCCTGCG GAGGCACCTG CCGGAGAGCC CGCGCTGGCT GGTCATGCAC GGCCGGGAGC AGGAGGCCGA GCGGGCGATC AGGGAGATCG AGGAGCACGT CCTGGAGTCC GGCAAGGAAC TGCCGCCGGT GGACGAGCGC AAGACCCTGG AGATCCGGCC GCACGGCACG GTCCGCTACC GCGACGTGAT CCGGGTGGTC TTCAAGGACT ATCCCAAGCG GTCCGCCCTC GGCGCCACCC TGATGATCAG CCAGTCCTTC CTCTACAACG CGATCTTCTT CACCTACGTG CTGGTGCTCT CGAACTTCTA CGGGGTCAGC GCGTCGGACG CGTCGAAGTA CCTGTTCCTG TTCGCGCTGG GCAACCTGCT CGGCCCGCTC CTGCTCGGCC CGCTGTTCGA CATCGTCGGC CGCAAGCCGA TGATCTCCTC CACCTACATC CTCTCCGGGC TCCTGCTGGC CCTGACCGGC TGGCTGTTCA AGGAGGGCGT GCTCACCGCG ACGACCCAGA CGCTGCTGTG GGCGGTCATC TTCTTCGTCG CCTCCGCGGC GGCCAGCTCC GGCTACCTGA CCGTCAGCGA GCTGTTCCCG CTGGAGATCC GGGCCCTGGC GATCGCGGTG TTCTTCGCGA TCGCCCAGAC GTTCGGCTCG CTCGGCCCGA CCGTCTTCGG CGCGCTGATC GGCGACCAGG CCCATCCGGA GCCGACCCGG CTGTTCTACG GCTACCTGTT CGCGGCGGCC ATGATGGTGG CCGCCGGGAT CATCACGATC TTCCTCGGGG TGAAGGCCGA GCGGGCCTCG CTGGAAGACC TCACCCCACC GCTCTCGCAG GTCGGGTCAT AG
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Protein sequence | MGAAQEQTIR TLIPARIDRM PWSRFHTRMV AALGVAWVLD GMEITIASAV GDVLRAPETL GLTSTEVGFA ATVYLLGQVT GALVFGRLSD RLGRRKLFIF TLGVYLVANG LTALSFDYWW LLLFRFIAGT GIGGEYSAIH SAIDELIPAR YRGRIDLAVS GTYWLGAMIG TASTFILLNP DLLPVNVGWR LGLLIGPLLG LAIWGLRRHL PESPRWLVMH GREQEAERAI REIEEHVLES GKELPPVDER KTLEIRPHGT VRYRDVIRVV FKDYPKRSAL GATLMISQSF LYNAIFFTYV LVLSNFYGVS ASDASKYLFL FALGNLLGPL LLGPLFDIVG RKPMISSTYI LSGLLLALTG WLFKEGVLTA TTQTLLWAVI FFVASAAASS GYLTVSELFP LEIRALAIAV FFAIAQTFGS LGPTVFGALI GDQAHPEPTR LFYGYLFAAA MMVAAGIITI FLGVKAERAS LEDLTPPLSQ VGS
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