Gene Sros_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3347 
Symbol 
ID8666635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3673017 
End bp3673997 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003339029 
Protein GI271964833 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00327914 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGTCCCTGA CCGTACCCGC CCTCCACGTC AACTGGACCG GTCCGCACCG GGCCGGCCTC 
CGCCGCCACC GGGACCGGGC CCTGGAGAAC GGCCCCTACG GCATGCCGGT CGAGGAGATC
CTCACCTGCG TCCACAGCGC CCACGCCTGG CGGGCCTTCC ACGGCGGCGT CGAGCTGGTG
ACCGACGAGC TGGGCGCCTC CTACGCGGCG GCACAGGGAC TGGACGCGCT CTACGACCGC
ATCGACACCT CCCTCGACGC CCTCGACGCC CTCGACGTGG ACCCGCTGTT CTACTTCGCG
GCGGGCAAGA GCTACGCGGC CCGGCTGCGC GCCGCGCCGT TCGCCGTCGT CGACACCGAC
CTCTACCTGC GCCGTCCCGT CGACGGGCTG GAGCGCGGCG GGTTCGTCTT CGCGCACTGG
GAGTCGGTGG GCAACGACGT CTACCCGCCG GTTCCGGAGG TCCCCAACCA GGCCGGCCTG
GACCTGTCGC GCTGGACCTT CGACACCCCG GCGGCCAACA TGGCGGTCTC GATCTTCCTC
GACGACCGGC ACCGCGCCGA GTACGCCGAG GCGTCCATGG CGTTCATGAC CGGCAACGCC
GGGCCGTCGG CCACCGCCCC GATCGTCCGC CAGACCTTCG CCGAGCAGCG CATCGCCCCC
GCGGTCGCCC GCTCCCTCGG GGTGGACCTG CGTCCGGTCA CCGAGCGTTT CTGGATCGTG
GAGACGGAGG AGTGGGACGG CCCCTCCTAC GCCGACCGCT TCCACCACAC CTGGAACCAG
AAACGGCTGC TGCGCCAGTT CCCCGAGCTG CGCCCGGCCT ACTGGCGCTA CCTGCTGGAG
GACCTGCTGT GGCGCTTCCC CGGCACCGGC GATCTGCTGC TGTCGGTGCC CGCGCTCAAG
GAGTGCGCCG ACCTCGTCCG CACCGTCCGG CGCGACCTGG CCGCCCACGG CCCCAGCCTG
ATCGAATGGA GCACCCCGTG A
 
Protein sequence
MSLTVPALHV NWTGPHRAGL RRHRDRALEN GPYGMPVEEI LTCVHSAHAW RAFHGGVELV 
TDELGASYAA AQGLDALYDR IDTSLDALDA LDVDPLFYFA AGKSYAARLR AAPFAVVDTD
LYLRRPVDGL ERGGFVFAHW ESVGNDVYPP VPEVPNQAGL DLSRWTFDTP AANMAVSIFL
DDRHRAEYAE ASMAFMTGNA GPSATAPIVR QTFAEQRIAP AVARSLGVDL RPVTERFWIV
ETEEWDGPSY ADRFHHTWNQ KRLLRQFPEL RPAYWRYLLE DLLWRFPGTG DLLLSVPALK
ECADLVRTVR RDLAAHGPSL IEWSTP