Gene Sros_3273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3273 
Symbol 
ID8666561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3562207 
End bp3563664 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content71% 
IMG OID 
ProductTrypsin-like protein serine protease typically periplasmic containing C-terminal PDZ domain-like protein 
Protein accessionYP_003338955 
Protein GI271964759 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAAAGC GGCTGTCAGA GGATTCGGAG AACCGAGATC ATCCCCTTAA CGTGCTCTTA 
CACGGCCTGG GGCATCGTTT CAGTCACCGG GAGGACCGGT CGCCGCTCGG CACCCACGGG
CGGACGTACG AGTTGGGGGA AGACATGGAA CCGGACAAGA ATGAGCAGGA CATCACCCCG
GCCGAGACGA CCTCCGGGAA CGACGGGTGG AGCCAGTTCG GCAAGGTGCC GCCGCGCGCG
GGCGCGTACC CCGCGGGAGG GGACACCGGA TCGCAGCCGA CGCTGATCCA TCCGGTGCAG
GGACCGCTCG CGGCCGAGGC GCCCACGGTG CCCGCCCAGC GGCCCTCGCT CACCATCGGG
CAGAAGGTGG GGGCGGGACT CGCGCTGGCC GCGATGGCCG TCGGCGGTGG AGTGGCGGGG
GCCTTCGCCG TGACCTCCTT CGGCGGCACC ACCGCGATCG GCTCCTCCAC CAGCCCGATC
GTCAGCCCGG TGAGCAACGT GACCACGGTC GCCGACGTCG CCAAGGCCGT CCAGCCCGCG
GTGGTGTCCA TCCATGTCAA GACCGGCAAC GGCGGCGGCG AGGGGTCCGG CGTGGTGCTG
TCGGCCGACG GCCTGATCCT GACCAACAAC CACGTGGTGG AGTCCGGCGG GGCCGGCCAG
GGTGCCCAGG TGACCGTCAA GTTCAGCGAC GGCAAGTCCG CCACCGCGAA GGTCGTCGGC
ACCGACCCCG TCACCGACCT CGCGGTCATC AGGGCGAACG ACGTCTCCGG CCTCACCGCG
GCCTCGATCG GCGACAGCGA CCGGCTCAAG GTGGGCGACT CCGTGCTCGC CATCGGCAGC
CCGCTCGGCC TGTCCGGCTC GGTCACCGCC GGAATCGTCA GCGCGCTGAA CCGCACGCTG
ACCGTCGGCG GCCAGCAGCA GCAACAGCTC CCGCCCGGCT GGGGCAACGG CATGCAGCAG
AGCGGCAGCG CGCCCACCGC CATCGGCGGC GCGATCCAGA CCGACGCGGC GATCAACCCG
GGCAACTCCG GCGGCGCGCT GGTCAACGCG TCCGGGCAGT TGGTCGGCAT CAACACCGCC
ATCGCCACCA ACGGCGGGGA CGGCAACATC GGCGTCGGCT TCGCCATCCC GATCAACACC
GCCAAGCAGG TCGCCCAGCA GCTCATCGAC AAGGGCAAGG TCACCCACGC CTTCATGGGC
GTGAGCTTCG CACCCGTCAC CGGCGACGCG GGCGGCGCCA TGGTCGCCCA GGTGACCGAC
GGCAGCCCCG CGGCCCAGGC CGGGATCAAG CAGGGCGACC TGATCACCAA GATCAACGAC
ACCGTGGTCG AGGACAGCAC CACCGTCGTC GGCGCCGTCC GCGGCTTCAA GCCGGGACAG
AAGGTGACCG TGACCTACGT CCGCGACGGC CAGACCCAGA CCGCCGCGGT GACCCTCGCC
GAGAAGACCG GGGAGTAG
 
Protein sequence
MIKRLSEDSE NRDHPLNVLL HGLGHRFSHR EDRSPLGTHG RTYELGEDME PDKNEQDITP 
AETTSGNDGW SQFGKVPPRA GAYPAGGDTG SQPTLIHPVQ GPLAAEAPTV PAQRPSLTIG
QKVGAGLALA AMAVGGGVAG AFAVTSFGGT TAIGSSTSPI VSPVSNVTTV ADVAKAVQPA
VVSIHVKTGN GGGEGSGVVL SADGLILTNN HVVESGGAGQ GAQVTVKFSD GKSATAKVVG
TDPVTDLAVI RANDVSGLTA ASIGDSDRLK VGDSVLAIGS PLGLSGSVTA GIVSALNRTL
TVGGQQQQQL PPGWGNGMQQ SGSAPTAIGG AIQTDAAINP GNSGGALVNA SGQLVGINTA
IATNGGDGNI GVGFAIPINT AKQVAQQLID KGKVTHAFMG VSFAPVTGDA GGAMVAQVTD
GSPAAQAGIK QGDLITKIND TVVEDSTTVV GAVRGFKPGQ KVTVTYVRDG QTQTAAVTLA
EKTGE