Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3273 |
Symbol | |
ID | 8666561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3562207 |
End bp | 3563664 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | Trypsin-like protein serine protease typically periplasmic containing C-terminal PDZ domain-like protein |
Protein accession | YP_003338955 |
Protein GI | 271964759 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAAAGC GGCTGTCAGA GGATTCGGAG AACCGAGATC ATCCCCTTAA CGTGCTCTTA CACGGCCTGG GGCATCGTTT CAGTCACCGG GAGGACCGGT CGCCGCTCGG CACCCACGGG CGGACGTACG AGTTGGGGGA AGACATGGAA CCGGACAAGA ATGAGCAGGA CATCACCCCG GCCGAGACGA CCTCCGGGAA CGACGGGTGG AGCCAGTTCG GCAAGGTGCC GCCGCGCGCG GGCGCGTACC CCGCGGGAGG GGACACCGGA TCGCAGCCGA CGCTGATCCA TCCGGTGCAG GGACCGCTCG CGGCCGAGGC GCCCACGGTG CCCGCCCAGC GGCCCTCGCT CACCATCGGG CAGAAGGTGG GGGCGGGACT CGCGCTGGCC GCGATGGCCG TCGGCGGTGG AGTGGCGGGG GCCTTCGCCG TGACCTCCTT CGGCGGCACC ACCGCGATCG GCTCCTCCAC CAGCCCGATC GTCAGCCCGG TGAGCAACGT GACCACGGTC GCCGACGTCG CCAAGGCCGT CCAGCCCGCG GTGGTGTCCA TCCATGTCAA GACCGGCAAC GGCGGCGGCG AGGGGTCCGG CGTGGTGCTG TCGGCCGACG GCCTGATCCT GACCAACAAC CACGTGGTGG AGTCCGGCGG GGCCGGCCAG GGTGCCCAGG TGACCGTCAA GTTCAGCGAC GGCAAGTCCG CCACCGCGAA GGTCGTCGGC ACCGACCCCG TCACCGACCT CGCGGTCATC AGGGCGAACG ACGTCTCCGG CCTCACCGCG GCCTCGATCG GCGACAGCGA CCGGCTCAAG GTGGGCGACT CCGTGCTCGC CATCGGCAGC CCGCTCGGCC TGTCCGGCTC GGTCACCGCC GGAATCGTCA GCGCGCTGAA CCGCACGCTG ACCGTCGGCG GCCAGCAGCA GCAACAGCTC CCGCCCGGCT GGGGCAACGG CATGCAGCAG AGCGGCAGCG CGCCCACCGC CATCGGCGGC GCGATCCAGA CCGACGCGGC GATCAACCCG GGCAACTCCG GCGGCGCGCT GGTCAACGCG TCCGGGCAGT TGGTCGGCAT CAACACCGCC ATCGCCACCA ACGGCGGGGA CGGCAACATC GGCGTCGGCT TCGCCATCCC GATCAACACC GCCAAGCAGG TCGCCCAGCA GCTCATCGAC AAGGGCAAGG TCACCCACGC CTTCATGGGC GTGAGCTTCG CACCCGTCAC CGGCGACGCG GGCGGCGCCA TGGTCGCCCA GGTGACCGAC GGCAGCCCCG CGGCCCAGGC CGGGATCAAG CAGGGCGACC TGATCACCAA GATCAACGAC ACCGTGGTCG AGGACAGCAC CACCGTCGTC GGCGCCGTCC GCGGCTTCAA GCCGGGACAG AAGGTGACCG TGACCTACGT CCGCGACGGC CAGACCCAGA CCGCCGCGGT GACCCTCGCC GAGAAGACCG GGGAGTAG
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Protein sequence | MIKRLSEDSE NRDHPLNVLL HGLGHRFSHR EDRSPLGTHG RTYELGEDME PDKNEQDITP AETTSGNDGW SQFGKVPPRA GAYPAGGDTG SQPTLIHPVQ GPLAAEAPTV PAQRPSLTIG QKVGAGLALA AMAVGGGVAG AFAVTSFGGT TAIGSSTSPI VSPVSNVTTV ADVAKAVQPA VVSIHVKTGN GGGEGSGVVL SADGLILTNN HVVESGGAGQ GAQVTVKFSD GKSATAKVVG TDPVTDLAVI RANDVSGLTA ASIGDSDRLK VGDSVLAIGS PLGLSGSVTA GIVSALNRTL TVGGQQQQQL PPGWGNGMQQ SGSAPTAIGG AIQTDAAINP GNSGGALVNA SGQLVGINTA IATNGGDGNI GVGFAIPINT AKQVAQQLID KGKVTHAFMG VSFAPVTGDA GGAMVAQVTD GSPAAQAGIK QGDLITKIND TVVEDSTTVV GAVRGFKPGQ KVTVTYVRDG QTQTAAVTLA EKTGE
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