Gene Sros_3258 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3258 
Symbol 
ID8666546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3546896 
End bp3547732 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content64% 
IMG OID 
Product30S ribosomal protein S1 
Protein accessionYP_003338943 
Protein GI271964747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.686673 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.719816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGACGG TGGAAGACGA TCAGCCCCTT GCCGCGTTCA TGGCGACAGT GAACGTTGGC 
GACACCCTCG CCGGCACCGT GGCCGACGTG ACACGATCGG GGGCAACGGT GCTCCTCGAC
AGCTTCGTCG CCGCTCCGGT CGGCGTCATC GGCTCCCTTG ATCTTTCCTG GCAGTCCTTC
CAACGTTCGG CTGGTGGGAT CCTGCATGTC GGCGACCGGG TCTCTGCCGA GGTCATCGCC
GTCGATTCTC AGGGCGGGCG AGTCCTGCTC TCCCGGGCAG CCGTCGAGAA CCCCCAACTC
TGGGCGTTCC TCAAGGCATT GCGACCGGGA CAGCGCTTGT CCGGCACCGT GGCGGCTATC
GAGAGTTTTG GCATCTTCGT CGATCTGGAG GACGGGCCGA AGCACCCCGT CTTCCCCGGC
GTCGGCTTCA TCACCATGCC CGAGCTGTCC TGGCGCAGAT TCGAGGACCC GTCCGAGATC
GTCTCGATGG GACAGCACAT CACCTGCGAA GTCCTCACAT TCGATACCAC CAACGGTGAG
GCCCGGCTGT CGCTGCGTGC CACTCAACCT GATCCCTTCC AACAGTTCAC CCGCGTCATT
CACGTTGGGC AGATCCTGCA CGGCCCGGTC ACCAAACTGG TGCCTTTCGG AGCCTTCGTC
CGCGTCGCAG ACGGCGTCGA AGGCCTGATC CACCTCAGTG AGCTCTCCAC CGCACCCATC
GAGACACCCG ACCAAGTAGT CCAGGAAGGT GAGGAGGTCA CGGTCATCGT CACTGACATC
GACCTGCCAC GACGCCGGCT CGCTCTATCG CGCCGCCGAC GCTCGGCGCT CCATTGA
 
Protein sequence
MGTVEDDQPL AAFMATVNVG DTLAGTVADV TRSGATVLLD SFVAAPVGVI GSLDLSWQSF 
QRSAGGILHV GDRVSAEVIA VDSQGGRVLL SRAAVENPQL WAFLKALRPG QRLSGTVAAI
ESFGIFVDLE DGPKHPVFPG VGFITMPELS WRRFEDPSEI VSMGQHITCE VLTFDTTNGE
ARLSLRATQP DPFQQFTRVI HVGQILHGPV TKLVPFGAFV RVADGVEGLI HLSELSTAPI
ETPDQVVQEG EEVTVIVTDI DLPRRRLALS RRRRSALH