Gene Sros_3253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3253 
Symbol 
ID8666541 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3543024 
End bp3544298 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338939 
Protein GI271964743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.374377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTTCG TCAAGATCAC TGCAATGGTC GCCGGGCTGG CGCTGGCCGC GGTCACCGCG 
CCCGCCACGG CCGCCCCCGC GGTCCTGGCC CATCACGCGC CTGCCGGGCA TCGCGTCACG
TTGGCCCATC CTGCGCCTGC CGGGCATCGC GTCACGTTGG CCCTGCCCGC GCCTGCCGGG
CCGTACCCCG TCGGCACCCT CGCCGTGCGC CTGGTCGACC GGTCGCGCCC CGACCCCCTG
GTCAGGTCGG AGCCCTATCG GGAGCTGATG GTCAGCCTGT GGTACCCGGC GAAGGACACC
GGCCGGACCC TGCCCGTCGC CCCCCATATG GCACCCTTGG CCGCGGCCGA CTGGGATCGT
CACTCCGCGC CGCCCATGGG CATCGCGGCG GGCGCGGTGG ACTGGGCCGC CACGCCCGCC
CATGCCCGCG TCGGCGCGCC GGTGGACCGC CGGGCGGGCA GGCTCCCGGT CGTGCTCTTC
GGCTCCGGGG ACGGCGGCCC GCGCACGCTC GGCACCTCCC TGGTGGAGGA CCTGGCCGCC
CGTGGCTACC TGGTCGTCAC CGTGGACCAC ACCTACGAGG CCGACCAGGT GGAGTTCCCC
GGCGGGCGGG TCGCGCGAGC CGTCCCCCTG CCGAAGAAGC TGACTCCGCG CGTCATCGCC
AAGCTGCTCG CGCGGCACTC GCGGGCCCGC CTTGCGGACA TGCGGTTCGT CCTCGACAGG
ATCGCCGCGC TGGGACACGG CCACGGTCTC GGCGAGGAGG CCGGGCAGCT GCCCGCCGGG
CTGCGCGGCG CCCCGGACCT GTCCCGGGTG GGAGTGCTCG GCCAGTCCCT CGGCGGGTCG
GTGGCCGCAC AGCTTGTCCA CGACGACCGG CGCGTGGACG CGGGTGTCAA CCTCGACGGC
GGCTATGTCG GCCGGGTGGC GAAGACCGGC GTCGCCAAAC CGTTCCTGCA GGTCGCAGCC
GAGGCGCACA CCCGGGCGAG CGAACCGAGC TGGAAGTCCT TCCGGGATGC CTCGACCGGC
TGGAAACGGG AGCTGCGCTT CGCGGGCGCG GCGCACGGCT CGTTCACGGA CCTCCAAGTC
ATGCTGCCGC AGATCGCAGC GGCGTTGCCG AAGGTGCCCG CCGCCGACTT CATCGGCACG
ATCGACCCCG GCCGGTCCGT GTCGGCCCAG CGCGCCTACG TCGCGGCCTT CTTCGACCTG
CACCTGAACA GGCGGCCAAC CCGGCTCTTC GACACCCCCG ACGCCCGCTT TCCCGAAGTC
TCCCTCATCC CCTGA
 
Protein sequence
MFFVKITAMV AGLALAAVTA PATAAPAVLA HHAPAGHRVT LAHPAPAGHR VTLALPAPAG 
PYPVGTLAVR LVDRSRPDPL VRSEPYRELM VSLWYPAKDT GRTLPVAPHM APLAAADWDR
HSAPPMGIAA GAVDWAATPA HARVGAPVDR RAGRLPVVLF GSGDGGPRTL GTSLVEDLAA
RGYLVVTVDH TYEADQVEFP GGRVARAVPL PKKLTPRVIA KLLARHSRAR LADMRFVLDR
IAALGHGHGL GEEAGQLPAG LRGAPDLSRV GVLGQSLGGS VAAQLVHDDR RVDAGVNLDG
GYVGRVAKTG VAKPFLQVAA EAHTRASEPS WKSFRDASTG WKRELRFAGA AHGSFTDLQV
MLPQIAAALP KVPAADFIGT IDPGRSVSAQ RAYVAAFFDL HLNRRPTRLF DTPDARFPEV
SLIP