Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3250 |
Symbol | |
ID | 8666538 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3540135 |
End bp | 3540968 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | putative TonB-dependent receptor |
Protein accession | YP_003338936 |
Protein GI | 271964740 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.112964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTAAAT TCATAGGAAT CGCATCCACG ATCACCGCCC TGGCCCTCGC GCTGACGGCC TGCGGCTCGA CCGAGACCAC CACGGCCGGC GTCGGCACGA CCCCCGCCGC GGAGGTGCTC AAGGTCGGTG CGAGCCCGGT CCCGCACGCC CAGATCCTGA AGTTCGTCAA GGACAAGCTC GCCGCCAAGG AGGGCCTGAA CCTGGAGGTC GTCGAGTTCA CCGACTACGT CCAGCCGAAC GTGCAGCTCA ACGACGGCCA GCTCGGCGCC AACTACTTCC AGCACAAGCC CTACCTGGAG GACTTCAACG CCTCCAAGGG CACCAAGCTG AGCTTCGTCC AGCCGGTCCA CCTGGAGCCG CTGGGCCTGT ACTCCAAGAA GGTCACCGAC GTCGCCGGGC TGGCCTCGAA CGCGACCGTC GCCGTGCCGA ACGACGCCAC CAACCTGGGG CGGGCGCTGA AGCTGCTCGC CGACAACGGC CTGGTCACCC TGAAGGACGG GACCGGCACC GCGGCCACCG AGCGCGACGT GACCGGCAAC CCCAAGAACC TGAAGTTCCA GCCGCTGGAG GCCGCCCAGC TGCCCCGCTC GCTGGAGGAC GTGGACGCGG CCGTCATCAA CGGCAACTAC GCGCTCGAAG CCGGCCTCAA GCCGGCCGAG AACGCGCTGG TGCTGGAGAA GGCCGAGGGC AACCCCTACG CCAACGGCCT GGTGGTGGCA GCCGGCAGCG AGCAGGACCC CCGCGTGGTC AAGCTCGCCA AGCTGCTCGC CGGCCCCGAG GTGAAGCAGT TCATCGAGCA GACCTACAAG GGAGCCGTCA TCCCCGCCTC CTAG
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Protein sequence | MRKFIGIAST ITALALALTA CGSTETTTAG VGTTPAAEVL KVGASPVPHA QILKFVKDKL AAKEGLNLEV VEFTDYVQPN VQLNDGQLGA NYFQHKPYLE DFNASKGTKL SFVQPVHLEP LGLYSKKVTD VAGLASNATV AVPNDATNLG RALKLLADNG LVTLKDGTGT AATERDVTGN PKNLKFQPLE AAQLPRSLED VDAAVINGNY ALEAGLKPAE NALVLEKAEG NPYANGLVVA AGSEQDPRVV KLAKLLAGPE VKQFIEQTYK GAVIPAS
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