Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sros_3249 |
Symbol | |
ID | 8666537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Streptosporangium roseum DSM 43021 |
Kingdom | Bacteria |
Replicon accession | NC_013595 |
Strand | + |
Start bp | 3539402 |
End bp | 3540058 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003338935 |
Protein GI | 271964739 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.436126 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGTGGG ATGAGATGAC CCCCCTGCTG TGGGAGTCGA CCTGGCAGAC CGCCCAGATG GTCGCCTGGT CCACCCTGTT CACCGTGCTG ATCGGGCTGC CGCTCGGCGT GGCGCTGGTC GTCACCGACC GGGACGGCCT GTTCCCGTCG TGGACCCTGA ACCGGGTGCT CGGGCTGGTC GTCAACATCG GCCGCTCCCT GCCGTTCATC GTCCTGATGA TCGCGGTCAT CCCGCTGACC AGGATGATCG TGGGCACGAC CATCGGCACC GTCGCCTCGG TGGTCCCCCT CACCCTCGGC GCCGCGCCGT TCTTCGCCCG GCTGGTGGAG ACCGCTCTGC GCGAGGTCGG CCGGGACAAG GTGCAGGCCG CCCAGGCCAT GGGGGCCGGC GGGAGCACCA TCGTCGGCAA GGTCCTGCTG CCCGAGGCGA TGGCGGGCCT GGTCGCGGGG CTCACCGTGA CCGTGGTCGC GCTGATCTCC TACTCGGCGA TGGCCGGGGC GATCGGCGGC GGCGGTCTCG GCGACCTGGC CATCCGCTAC GGCTACCAGC GCTTCGAGAC CACGCTCATG GTGGTCACCG TCGTCGTGCT GATCGTCATC GTCCAGCTCG TGCAGACCCT GGGCGACACC GTCGCCCGCC GTCTCGCGCG TCACTGA
|
Protein sequence | MTWDEMTPLL WESTWQTAQM VAWSTLFTVL IGLPLGVALV VTDRDGLFPS WTLNRVLGLV VNIGRSLPFI VLMIAVIPLT RMIVGTTIGT VASVVPLTLG AAPFFARLVE TALREVGRDK VQAAQAMGAG GSTIVGKVLL PEAMAGLVAG LTVTVVALIS YSAMAGAIGG GGLGDLAIRY GYQRFETTLM VVTVVVLIVI VQLVQTLGDT VARRLARH
|
| |