Gene Sros_3231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3231 
Symbol 
ID8666519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3519012 
End bp3520451 
Gene Length1440 bp 
Protein Length479 aa 
Translation table11 
GC content71% 
IMG OID 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_003338917 
Protein GI271964721 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.991608 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.404432 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAGAG TTATGGACAA CGGCCACATT GGGCTCAGCT CAGCCCGGGG ACGGTGGGTT 
CTGCTGACCA CCGTGCTCGG TTCGGGGATG GCGCTGCTGG ACGGCACGGT CGTCAACGTG
GCGCTCCCCG CGCTCGGCGA CGCTCTCGGA GCCGACATGG CGGGCCTGCA GTGGACCGTC
AACGCCTACA CCCTCACTCT CGCGGGTCTG ATCCTGCTGG GCGGCTCGCT CGGCGACCGG
TACGGCAGGC GCAGGATCTT CCTGATCGGC GTGATCTGGT TCGCCGTCGC GTCGGCCCTG
TGCGGGCTGG CGCCCAACGT GGAGACGCTG ATCGCGGCCC GCGCGCTCCA GGGCGTCGGC
GGGGCGTTGC TCACTCCGGG ATCGCTGGCC ATCATCCAGG CGTCCTTCGT CCGCGAGGAC
CGGCCCAGGG CGATCGGAGC CTGGTCGGGG CTGGGCGGGA CGGCGGCGGC CATCGGGCCG
CTCCTCGGCG GGTGGCTGGT GGAGACGGCC GGATGGCGGT GGGTGTTCCT GATCAACCTG
CCGGTGGCCG CGCTCGTGGT GGCGGTGGCC GTACGGCATG TGCCGGAGAG CAGGGACGTG
GAGGCCACCG GGCGCTTCGA CGTGCTCGGC TCGGCGCTGG CCGCGCTGGC ACTGGCCGGG
ATCACCTACG GCCTGATCGA CCTGCGGCCG GTCCCGATCG CGGTGGGCGT CCTGCTGGGA
GTGGCGTTCG TCTGGCTGGA GATCAGGCGT TCACCCGACG CGCTGGTGCC GGTCGGGGTC
TTCACCTCCA GGGTGTTCAC GGCGGTCAAC GTCGTCACGT TCATCATGTA CGCCGCGATG
AGCGTGGTGT TCTTCCTCCT GGTCGTCCAG CTCCAGGTGT CGGCGGGCTT CTCACCGATG
ACGGCCGGAT CCGCGATGAT CCCGGTCACG GTCCTGATGC TGCTGCTGTC GTCGCGGGCG
GGCGAGCTGG CCAAGCGGAT CGGGCCCCGC ATCCCGATGA CGGCGGGCCT CCTGATCTGC
GCCGCCGCGC TGCTGCTGAT GTCGAGGATC GGCGAGGGCT CGTCCTACCT GACGGACGTG
CTGGTCCCGG CGGCCATGTT CGGCCTGGGG CTGTCGGCGG CGGTCGCGCC GCTCACCGCG
ACCGTGCTGG CCACCGCCGA GGAGCGCTAC GCGGGAGTGG CCAGCGGCGT CAACAACGCC
GTCGCCCGGA CCGGCGGGCT GCTGGCGGTC GCCGCGATCC CGCCGCTGGC CGGCCTGACC
GGCGACGCCT TCCACGACCC GGCCTCCTTC ACCACCGGAT TCCACACGAC GATGCTGGTC
AGCGCGGCGA TGATGGTCGT CGCCGCGCTG ATCGCCCTTC TCACCATCCG CGAGAACGTC
CTGGCCGACT CCCACCCGCA GATGTGCTGC CCGGTGGAGG CTCCCCAGCA GGGCAGGTGA
 
Protein sequence
MMRVMDNGHI GLSSARGRWV LLTTVLGSGM ALLDGTVVNV ALPALGDALG ADMAGLQWTV 
NAYTLTLAGL ILLGGSLGDR YGRRRIFLIG VIWFAVASAL CGLAPNVETL IAARALQGVG
GALLTPGSLA IIQASFVRED RPRAIGAWSG LGGTAAAIGP LLGGWLVETA GWRWVFLINL
PVAALVVAVA VRHVPESRDV EATGRFDVLG SALAALALAG ITYGLIDLRP VPIAVGVLLG
VAFVWLEIRR SPDALVPVGV FTSRVFTAVN VVTFIMYAAM SVVFFLLVVQ LQVSAGFSPM
TAGSAMIPVT VLMLLLSSRA GELAKRIGPR IPMTAGLLIC AAALLLMSRI GEGSSYLTDV
LVPAAMFGLG LSAAVAPLTA TVLATAEERY AGVASGVNNA VARTGGLLAV AAIPPLAGLT
GDAFHDPASF TTGFHTTMLV SAAMMVVAAL IALLTIRENV LADSHPQMCC PVEAPQQGR