Gene Sros_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3172 
Symbol 
ID8666460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3454144 
End bp3455133 
Gene Length990 bp 
Protein Length329 aa 
Translation table11 
GC content71% 
IMG OID 
Productoligopeptide/dipeptide ABC transporter, ATP- binding protein-like protein 
Protein accessionYP_003338860 
Protein GI271964664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGCGC CCGTCCTGCG GGTGGACGAC CTCAGCGTGG AGTTCGCCAC CCGCGAGGGG 
GCGGTCCGCG CGGTACGCAA CGTCGGTCTT GAGGTCTTCG CCGGCCGTAC GCTCGCGCTC
CTCGGCGAAT CGGGGTCGGG CAAGTCGGTG ACGGCCCAGG CGGTCATGGG TCTGCTGGAC
ACGCCGCCGG CGCGCATCAC CTCCGGAAGC ATCATGTTCG AGGGCACCGA CCTGGTGACC
GCGGCCGAGC GGGTCCGCCG GCAGGTCAAC GGCGAGGGCG TCGCCATGGT CTTCCAGGAC
GCGCTGTCCG CGCTCAACCC CGTCTACACG GTGGGCCATC AGATCAGTGA GCTGCTGCGG
GTCCGGCGGA AGATGTCCCG TTCCGCCGCG CGAGCCCGGG CCGTCGAGCT GATGGAACGG
GTGCGGATCC CCGCCGCGGC ACGCCGCGTC GACGACTATC CGCACCAGTT CTCGGGCGGC
ATGCGCCAGC GGATCATGAT CGCCCTGGCG GTCGCGCTCA ACCCGCGCGT GCTCATCGCG
GACGAGCCCA CCACAGCCCT GGACGTCACG GTGCAGGCGC AGATCATGGA GCTGCTGACC
GAGCTCCAGC GCGAGAACGG GATGGGGATG GTGCTCATCA CCCATGATCT CGGAGTGGTC
GCCGAGGTGG CCGACGACGT GACCGTGATG TACGCGGGCC GGATCGTCGA ACGCGGTTCC
GTGGAGGAGC TCTTCGAGCA CGCGGCCCAC CCGTACACCC GGGGGCTGCT GCGCTCGATG
CCGCGGACGG ACCGAGAGGA CGACGAGCTG TGGGCCATCC CCGGCGCGCC GCCGAGCCCG
GTGCTGACGC CGAAGGGGTG TGCGTTCCAT CCGCGCTGCG ACATCGCGAT CGACCTGTGC
CGGTCCGAGC AGCCCGGCCT TGAGGTGATC GCGGCAGGCC GCACCAGCGC CTGCCATCTG
CGCGCGGAGG TGTTCGATGG GCGAGCGTGA
 
Protein sequence
MNAPVLRVDD LSVEFATREG AVRAVRNVGL EVFAGRTLAL LGESGSGKSV TAQAVMGLLD 
TPPARITSGS IMFEGTDLVT AAERVRRQVN GEGVAMVFQD ALSALNPVYT VGHQISELLR
VRRKMSRSAA RARAVELMER VRIPAAARRV DDYPHQFSGG MRQRIMIALA VALNPRVLIA
DEPTTALDVT VQAQIMELLT ELQRENGMGM VLITHDLGVV AEVADDVTVM YAGRIVERGS
VEELFEHAAH PYTRGLLRSM PRTDREDDEL WAIPGAPPSP VLTPKGCAFH PRCDIAIDLC
RSEQPGLEVI AAGRTSACHL RAEVFDGRA