| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3152 |
|---|
| Symbol | |
|---|
| ID | 8666440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3432585 |
|---|
| End bp | 3433475 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | oligopeptide ABC transporter (permease) |
|---|
| Protein accession | YP_003338841 |
|---|
| Protein GI | 271964645 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0279701 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGTTGAGA CCCAGGTCAT GGAGGCCGAG ACGGTCCGGA CCCGCCCCGG GTCCCTGTGG
TACGACGCCT GGCTGGAGCT GCGCCACCGG GTGATCTTCT GGTTCTCGGC CGCGATCCTC
GTGGTCGCCA CCGCGATGGC CCTGCTGCCC GACCTGTTCG CCTCGTTCGG CCCGAACGAG
GGCTGCAACC TGCGGATGTC GAAGAAGGGC CCGATCGGCG ACGCGGTGTT CGGCTACGAC
ACGCAGGGCT GCGAATACTG GTCGCAGATC GTGCACGGCA CCCGCGCCTC CGTGCTGATC
GGCATCGCGG TGACGGCCTT CGCCCTGCTC ATCTCGGTCG TGCTGGGCAT GCTCGCCGGC
TACTACGGCG GCTGGATGGA CGCGTTCATC TCCCGCCTCA CGGACGTGTT CTTCGGCATC
CCGTTCGTCC TGGGCGCGAC CGTGATCCTC ATCGCCTTCC CCGACCACGG CGTCTGGGCG
ATGACCCTGG TGCTGGTCGT GCTGGGCTGG ACCACGATGA CCCGTCTCAT GCGCGCCCAG
GTGATCGCGG TCCGCGACAT GGACTTCGTG GCCGCCGCCC GGATGCTCGG CGCGAGCGAC
CGGCGGATCA TGTTCAAGCA CATCCTGCCC AACGCGATCG CCCCGGTCTT CGTGGTGGCC
ATGCTGAACG TGGGCAACGT CATCGCCGGC GAGGCCACCC TCGACTACCT GGGCGTCGGC
CTGCAGTATC CCGAGGTCTC CTGGGGCCTG CAGCTCAACG TCGCCCAGGC CTACTTCGCC
GAATACCCCC ACCTGCTCGT CTTCCCGTCG CTGTTCCTCA CCGCGACGGT GCTCAGCTTC
CTGCTCCTGG GCGACGTCGT CCGCGACGCC CTGGACCCCA AGCTGCGCTA G
|
|---|
| Protein sequence | MVETQVMEAE TVRTRPGSLW YDAWLELRHR VIFWFSAAIL VVATAMALLP DLFASFGPNE
GCNLRMSKKG PIGDAVFGYD TQGCEYWSQI VHGTRASVLI GIAVTAFALL ISVVLGMLAG
YYGGWMDAFI SRLTDVFFGI PFVLGATVIL IAFPDHGVWA MTLVLVVLGW TTMTRLMRAQ
VIAVRDMDFV AAARMLGASD RRIMFKHILP NAIAPVFVVA MLNVGNVIAG EATLDYLGVG
LQYPEVSWGL QLNVAQAYFA EYPHLLVFPS LFLTATVLSF LLLGDVVRDA LDPKLR
|
|---|
| |