Gene Sros_3151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3151 
Symbol 
ID8666439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3431669 
End bp3432592 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content69% 
IMG OID 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003338840 
Protein GI271964644 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.013844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGTACG CGCTCCACCG GCTGCTCCAG GCCGTCCCGG TCTTCTTCGT CACCACCTTC 
CTGATCTACG CGATGGTCTT CGCCCTGCCG GGTGACCCGA TCGTGGCCCT GGCCGGGGAC
AAGCCCCTGC CGGACGAGGT CCTGCACACG CTCCGGGAGC GTTACCACCT CAACGACCCG
CTGGTCGTCC AGTACGGCAT CTACATGCTC AACGCCTTCC AGGGCGACCT GGGGGAGACC
TTCACCGGGC AGCCGGTCAG CGAGCTGCTC CAGGGCCGCT GGGAGGTCAC CGCCCAGCTC
GCCGTCACCG CCTGGATCTT CGAGCTCGTG GTCGGCATCG GCCTCGGTGT GATCGCGGGG
CTGCGCCGGG GCGGGATCGC CGACACGGCG GTGCTGGCCG GCACCACCTT CGTCATCGCG
GTCCCGGTCT TCGTCGTCGG CTACACCGCG CAGATCACGC TGGGCCTGAA CCTCTCGCTG
TTCCCGACCG CGGGCGTGGA CGAGGGGTGG CCGGTCAGCT ACCTGCTGCC CGGCATGGTG
CTGGGCTCCT TCGGCCTCGC CTACGTGGCG CGGCTGACCC GCACCAGCCT GATCGAGAAC
ATGCGGGCCG ACTACATCCG CACGGCGCGC GCCAAGGGGC TGCGCCGCAG GCGGGTGATC
GGCAGGCACG CGCTGCGCAA CTCGCTGATC CCGGTGATCA CCTTCCTCGG CGTGGACTTC
GGCAACCTGA TGGCCGGCGC GGTCGTCACC GAGGGCATCT TCAACCTGCC GGGCATCGGC
CAGCAGGTCT TCCAGTCCAT CCAGCTCCAG GAGGGGCCCG TCGTCGTGGG CATCGTCACC
GTGCTCGTGA TGATCTTCAT CCTGGTCAAC CTGCTCGTCG ACCTCCTGTA CGGCGTGCTC
GACCCGAGGA TCCGCCGTGG TTGA
 
Protein sequence
MRYALHRLLQ AVPVFFVTTF LIYAMVFALP GDPIVALAGD KPLPDEVLHT LRERYHLNDP 
LVVQYGIYML NAFQGDLGET FTGQPVSELL QGRWEVTAQL AVTAWIFELV VGIGLGVIAG
LRRGGIADTA VLAGTTFVIA VPVFVVGYTA QITLGLNLSL FPTAGVDEGW PVSYLLPGMV
LGSFGLAYVA RLTRTSLIEN MRADYIRTAR AKGLRRRRVI GRHALRNSLI PVITFLGVDF
GNLMAGAVVT EGIFNLPGIG QQVFQSIQLQ EGPVVVGIVT VLVMIFILVN LLVDLLYGVL
DPRIRRG