Gene Sros_3144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3144 
Symbol 
ID8666432 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3423085 
End bp3424710 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content73% 
IMG OID 
ProductMFS family transporter 
Protein accessionYP_003338833 
Protein GI271964637 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.631195 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.502456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGGCTC CCCTGCGTCA CCGCCTGTTC CGCGCGCTGT GGATCGCCCA GCTCGTGTCC 
AACACGGGGA CGTGGATGCA GACCGTCGGC GCGCAGTGGC TCATGGGCGA CCTGGGCGGC
GACGCGCTGG ACATCGCCCT CGTGCAGACC GCCGCCACGC TCCCGATCTT CCTGCTCGTC
GTCCCCGCCG GCGCGCTGGG CGACATCCTC GACCGGCGCC GCCTGCTGCT GACCAGCCAG
GTGATCACCT TCACCGGCGC GGCGGCCCTC GCGGCGCTCA CCGCCGCCGA GGCCACGACG
CCGGCGCTTC TGCTCGTGCT GACCGGCGCG ATGGCCGTCG GTCAGGCCTT CGCCGTGCCC
ACCTTCCAGG CCATCCAGCC GGAACTCGTC AGGCTGGACG AGATCCCGCA GGCCGCGCTG
CTCAACGGCG CGAACGGCAA CGTGGCGCGG GCCGTCGGGC CCGCGCTCGG CGGCGTGCTC
ATCACCCTCG CGGGGCCGGA GGCGACGTTC GCCCTCAACG CGCTGTCCCT CTTCGGCGTC
ACGCTGGTGC TGTACGTCTG GAAGCGGCCG CCCGACCACC GCCCCCTGGG CGCGGAGCAC
ATCCGCGACG CGATCCGCGC GGGCGCGCGC TACGTCCGCA GCGCCCCGGA GTTCGCCTCG
GTCCTGTGGT GCTCGGTGGT CTTCACCCTC TGCGCCAGCG GGATGTGGGC CCTCCTGCCC
GCCCTCGCCC GCGGTCCCCT CGGGCTGGGC GCCGGGGGCT ACGGACTGCT GCTGGCCGGT
GTCGGCTCCG GCGCCGTCAT CGGCGCGTTC GCGCTCCCCG TCGTCCGCGG GCGGGCGGGA
CCGAACACGC TCGTGGCCGG TTCGACGACC TGCTACGCCC TGGCGATGAC CGTCATCGGC
ACGGTCGAGA GCATGCCGAT CGTCCTCGCC GCCCTGGTGG TGGCGGGTCT GGCCTGGATC
ACCGTGCTGT CGACGCTGAG CGCCTCGGCC CAGCTCCTGC TCCCGGAGTG GGCCCGCGCG
CGGTCGCTGG CCTACTACCA GCTGGTGTTC ATGGGCGGGC AGGCGGTGGG GTCGCTGGTG
TGGGGAGTGG TCGCCGACGC GCTGACCCTG CAGGCGGCCT TCCTGCTCCC GGCCGCCCTG
CTCATCCTGA GCACGCCGAT CGGCGTGTCG CGCGTGCCGC TGCCGACCGA GCACTTCGAC
ATGAGCCAGG TCAGCCACTA CCCCGAGCCG CCCGACGACC TGCAGCACGG CAGGGGGCCG
CTGCTGGTCG TGGTCGAATG GCGGGTCAGC CCGGAGAACG CCGAGGCGTT CCTGGAGGTG
ATGCGGCAGA TCGGCCGGGC CCGGCGGCGC ACCGGGGCCA CGATGTGGAG CATCTTCCAG
GACATGGAGG AGCCGACGCT CTATCTGGAG ACATTCACCG CCGAGACGGC GCACGAGCAC
CTGCGCCAGC ACGTCGAACG GGGCACGGCC ATGGACCAGG AGCTGGACCT GCGGGCACTG
AGCCTGGTCA TGGATGGCCA GTTCCCTGAG GTGCGCCATC TGATCTGGGC CTACGCGCCC
ATGCCCGGCG CCGAGACCAG GGAGCCGGAG TTCAGGTCGA TCGTGTCGAT GCTCCGTCCC
CGCTGA
 
Protein sequence
MWAPLRHRLF RALWIAQLVS NTGTWMQTVG AQWLMGDLGG DALDIALVQT AATLPIFLLV 
VPAGALGDIL DRRRLLLTSQ VITFTGAAAL AALTAAEATT PALLLVLTGA MAVGQAFAVP
TFQAIQPELV RLDEIPQAAL LNGANGNVAR AVGPALGGVL ITLAGPEATF ALNALSLFGV
TLVLYVWKRP PDHRPLGAEH IRDAIRAGAR YVRSAPEFAS VLWCSVVFTL CASGMWALLP
ALARGPLGLG AGGYGLLLAG VGSGAVIGAF ALPVVRGRAG PNTLVAGSTT CYALAMTVIG
TVESMPIVLA ALVVAGLAWI TVLSTLSASA QLLLPEWARA RSLAYYQLVF MGGQAVGSLV
WGVVADALTL QAAFLLPAAL LILSTPIGVS RVPLPTEHFD MSQVSHYPEP PDDLQHGRGP
LLVVVEWRVS PENAEAFLEV MRQIGRARRR TGATMWSIFQ DMEEPTLYLE TFTAETAHEH
LRQHVERGTA MDQELDLRAL SLVMDGQFPE VRHLIWAYAP MPGAETREPE FRSIVSMLRP
R