| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3141 |
|---|
| Symbol | |
|---|
| ID | 8666429 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | + |
|---|
| Start bp | 3419260 |
|---|
| End bp | 3420279 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase)-like protein |
|---|
| Protein accession | YP_003338830 |
|---|
| Protein GI | 271964634 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.754311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0847511 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCC GCATCGACCG TGACGGTCCC GCCGCCGCGA CCGGTCACCC ACGCGCCTCC
CACCGGACGG CGGGCTCGTC ATGGTCCGGC CGTCGCCCGC GCGCTGCGCG GGTGATCTTC
CTTGCCGGGG CGGGGGAGCG CGGAAACGCC GGGGCCCTGC GCGGATGGGC CACGATGTGT
GTGGGAGTGG GGCAGGACGC GCCGGGCTGG AGGCCCGGGG CCGGCCCTTC GGCCTCCGTG
ACACGAAAGC AGGAGCAGAA CATGAGTCGC TTCACTGGCA AGGTCGCCGT CGTCACCGGC
GCGGCCCAGG GCATCGGCGC CGCGATCGCC GCCCGCCTCG CCGAGGAGGG CGCGGCCGTG
GCGGTCGTCG ACCTCACCGC CGAGAGGGCG CAGGCCACCG TCGACGCCAT CACCGCCAAG
GGCGGCCTCG CCCGCGCCTA CGGTTGCGAC GTCGCCGTCA AGCCGGAGGT CGAGGCCGTG
TTCGAGCGGG TGGCGGCCGA GCTGAACGGG CTGCACATCC TGGTGAACAA CGCGGGCATC
ACCCGCGACA ACCTCTTCTT CAAGATGTCG GCCGAGGACT GGAGCTCGGT GCTCACCGTC
AACCTCACCA GTGCCTTCAA CTGCAGCCAG GCCGCGCAGA AGGTCATGGT GGCCCAGAGA
TACGGGAAGA TCGTCAGTCT GAGCAGCCGT TCGGCCCTCG GCAACCGGGG GCAGGCCAAC
TACGCCGCGG CCAAGGCCGG CATCCAGGGG CTCACCGCGA CGCTGGCGAT CGAGCTGGGG
CCGTACAACA TCAACGTCAA CGCGGTGGCG CCGGGATACA TCGCGACCCC CATGACCGCG
GCGACCGCCG AGCGTGTCGG CTCCTCCGCC GAGGAGCACC AGAAGGCGGC CGCCGAGCGG
ACGCCGCTGC GCCGGGTGGG GACGCCCGAG GAGGTGGCGT CGGTGGTCGC CTTCCTGGCC
AGTGAGGACG CCTCCTATGT CAGCGGTCAG ACCATCTACA TCAACGGCGG CGCCCGCTGA
|
|---|
| Protein sequence | MAGRIDRDGP AAATGHPRAS HRTAGSSWSG RRPRAARVIF LAGAGERGNA GALRGWATMC
VGVGQDAPGW RPGAGPSASV TRKQEQNMSR FTGKVAVVTG AAQGIGAAIA ARLAEEGAAV
AVVDLTAERA QATVDAITAK GGLARAYGCD VAVKPEVEAV FERVAAELNG LHILVNNAGI
TRDNLFFKMS AEDWSSVLTV NLTSAFNCSQ AAQKVMVAQR YGKIVSLSSR SALGNRGQAN
YAAAKAGIQG LTATLAIELG PYNINVNAVA PGYIATPMTA ATAERVGSSA EEHQKAAAER
TPLRRVGTPE EVASVVAFLA SEDASYVSGQ TIYINGGAR
|
|---|
| |