Gene Sros_3135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3135 
Symbol 
ID8666423 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3413016 
End bp3413702 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003338825 
Protein GI271964629 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.376033 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTACC CCCCTGGCTA CGGCCGGCAG CCCCCACCCG GATACGGCTA CGGGTACGCG 
ACCCCGCCGC CGAAAACCAA CGGGCTCGCC GTCGCCAGCC TCGTGCTCGG CCTTACCGGG
TTCATCACCT GCGGATTCAC ATCGATCCTG GCCGTGGTGT TCGGACACGT GGCCCTCGGC
CAGATCAGGA GGGATCGCAC CGACGGCCAC AGCATGGCAT TGGCCGGCGT CATCCTCGGC
TGGATCCTCA CCGGCCTGTG GATCCTCTAC TGGATGCTCG TCGTCAGCGG CATCGTCGGC
GCCGGGTTCA CCGCCCTCGA CGACCCCGGG CCCGGCACGG GGCGCACGCA GCTCAGCCCC
AGCAGCCCGC CCGCCGCGCA GGATGAGCAG GAGAACACGT CGGGTGCGCA CACGGTGCTG
CTCGAAGCCA TCGGCAGCGA CGGGGCCACC AGCGCAGGCA ACATCACCTA CAGCGTGAAG
TACGGCATCA AGCAAGAGCA GGGCGTGCCC CTGCCGTACA GCAAAGAGAT CAAAGTCGGC
GACACCCCCT ACCTGTACCT GTGGGCGCAG AACGCAGGCG CCAAAGGGTC GGTGACGTGC
CGCATCACGG TCGACGACGA AGTCATGTGG GAGGACGTCG CGAAAGGCCC GTACGGGGTG
TGCACCGTCA CCGGCAACAC CCCATAG
 
Protein sequence
MSYPPGYGRQ PPPGYGYGYA TPPPKTNGLA VASLVLGLTG FITCGFTSIL AVVFGHVALG 
QIRRDRTDGH SMALAGVILG WILTGLWILY WMLVVSGIVG AGFTALDDPG PGTGRTQLSP
SSPPAAQDEQ ENTSGAHTVL LEAIGSDGAT SAGNITYSVK YGIKQEQGVP LPYSKEIKVG
DTPYLYLWAQ NAGAKGSVTC RITVDDEVMW EDVAKGPYGV CTVTGNTP