| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3126 |
|---|
| Symbol | |
|---|
| ID | 8666414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3402964 |
|---|
| End bp | 3405381 |
|---|
| Gene Length | 2418 bp |
|---|
| Protein Length | 805 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003338816 |
|---|
| Protein GI | 271964620 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.51395 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGGCGACG GGGACGGGGT ATCGGGGTCA ACCAGCGGCC GGCCGCGGCG CCTGGCCGGT
GCCCGCCGGC TGCCCTTGCG TACCGTGCTG ATCATTGTCG TGTCCGTACC GAGCATGACT
TTCACCCCGC TGCTGGGGTC GGGCGTATAC CAGCTGGCTA CTCAGTGGCA GGCGGAGAAG
ATCCAGATGG ATCTGGCCAC CGATACCGTC GGCAGACCTG CGGCCGACCT GTTCTTCAGC
CTTGAGCAGG AGCGACTGCT CACTGCGGAG ACGCAGGCCA GTCCCCGTAG CACCTCCCGC
GACAAGCTCG CCAAGCAGCG CGCGGTGACC GATCAGGCCG TGAGCGCCTT CCGTCCGCTG
GCAGCCCTGG ACACCACCGA CGGACAGGAG GGGCTCGCCG ACGCCATCGC CCGGACCCAA
CGCAACCTCG ACCTCCTCGA CCAGCAGCGG CGGGCGGTGG ACGCCGGTTG GTCCAGCGAG
CAGAAGGCGT TCGACTACTA CAACGGCGTC CTTGAGTCAG ACCTCAGCGT ATTGACCGCC
CTCAGCCACA CCGACCACGC CGAGGTGAGT AGCAAGGCGC AGACGCTGGT CGACCTCTTC
TGGGCCGTCG ACATGATCGG CCGCGAAGAC GCCATCCTGG CCCGCGGCTG GGAGACGGGG
CACCTGACGA GGGACGAGTA CGGCCTTGTC GCCGATGCCA TCGGCACCAG GAAGCACCTC
CTGCAGTCCC GGGTGGCCCC CAGTCTCCTG GGCAACGAGA GCCAGTACGG CGCGCTGACG
GCCAGTAAGG CGTGGGAGAC CATGACCGCG CTGGAGGGGC GGCTGCTCGC CTCCGAGACC
AGCGCCGGGA GCAACCAGGT GACACTCCGC GAGGTCGGCC CGGTGTGGCG ATCCTCGGTG
GACACGGTCA CCCCGCAACT GCTGCAAGTT CTCAATCTCC GGCTCGAAAA CGTCAGCAGG
ATCGGCTACG GCCACGCCGA TCGGCTCTTC GCGACCTTCA TCAGTGTCAC CGCCGTGGGC
CTGCTCGCCC TGGGCCTGGT CATCGTCACC ATCTGGCGCC TCACCGCCAT TCTTCGCCGG
CGCATCCTCC ACCTGCGCGA GGACGCCCAG GAACTCCAGG AGCGGCTGCC CAACGTGGTC
GCCCGGCTGG AGCGCGGCGA GGACGTCGAC GTGGACGCGG AAGTACACAT GGTCGAGCCC
ACCCCCGACG AGCTCGGCGA GCTCGGGAAA GCCCTCAATC TGGCCAGCCG CAGCGCTGTC
CTCACTGCCG TACGGCAGGC CGAACAACAC CGCGGCTTCC AACGCATGCT CCAGCGCATC
GCCCGCCGTA CCCAGATCCT CATCGGCCTT CAGCTGAAGA AGCTGGACGA ACTGGAACGC
AAGCACGAGG ACCCCGAGGT GCTGGAGGGC CTGTTCGACC TGGACCACCT CACCGCTCGG
CTGCGCCGCT ACGAGGAGAA CCTGGTGATC CTCGGCGGCG GTCAGCCGCA GCGCCGCTGG
CGCAAGCCGG TACGCCTGCT CGATGTACTG CGCGCCGCGC AGGGCGAGGT CCAGGACTAC
CGGCGGATCT CGATCGATGT CGAGGGCGAA CCCTGGGTAA CCGAGCGCGC GGTGGGACCG
TTGATCCACG TCCTGGCGGA ACTGATGGAG AACGCCACCG CCTTCTCCAA GCCACTGACC
CCCGTCGAGG TGCGGGCCGC ACCGGTCAGC CGGGGCCTCG CCGTGGAGAT CGAAGACCGC
GGCCTGGGCA TGGAACCCGA GCAGTACGCC GCCGCCAACG CCCTGATGCA GTCGCCGCCG
CAGCTCGATG TGATGACCCA CGCCGACGAT GTACGTCTCG GCCTGTATGT GGTCGCTCGG
CTCTCCGCGG GTCTGGGCCT CCAGGTGGAA CTGCGGCCGT CGGCCTTCGG CGGCACCCGT
GTCATCGTGC TGCTCCCGGA ACCGCTGGTG GTGGACCGCC CCCGCGCGGT ACCCGGGCCG
GCCGCACCCC CCGAGGAGGC CCCCCGGGAC CCCACCGGTC CGCAGCTCCA CCCGCACGAA
GGTACGGCCG GTCCCCGCCC GCCCCACGAG GACGCGCAGT TGCCGACTCG CTCCAGAGGG
CGTGCGATGG CATACGTGAC AGCGCCCACC GCCGGATCAC CGGATCAGGG TGACGCGCCC
CCGTCGTCCG GCCAGGAGCC GCTGCCCCAG CGGGTGCGCC AGGCCAGCCT GGTCACCGAG
CTCAAAGTCC CGGCGGACAG GGATGAACAG ACCGACCAGG AGGACTGGGC CGTACGCGAC
CAGCCCAGCC GATCCAGTGC CACGATCGGC GCGTTCCAGA GGCAGTCCCG CAGGCGCCGG
ACCGGTGACG ACACCTTCCA GCCCCGGCCG GACGGATCCC CCGAGCCCGG TTCCCCTACG
ACGGAAGATC GAAGATGA
|
|---|
| Protein sequence | MGDGDGVSGS TSGRPRRLAG ARRLPLRTVL IIVVSVPSMT FTPLLGSGVY QLATQWQAEK
IQMDLATDTV GRPAADLFFS LEQERLLTAE TQASPRSTSR DKLAKQRAVT DQAVSAFRPL
AALDTTDGQE GLADAIARTQ RNLDLLDQQR RAVDAGWSSE QKAFDYYNGV LESDLSVLTA
LSHTDHAEVS SKAQTLVDLF WAVDMIGRED AILARGWETG HLTRDEYGLV ADAIGTRKHL
LQSRVAPSLL GNESQYGALT ASKAWETMTA LEGRLLASET SAGSNQVTLR EVGPVWRSSV
DTVTPQLLQV LNLRLENVSR IGYGHADRLF ATFISVTAVG LLALGLVIVT IWRLTAILRR
RILHLREDAQ ELQERLPNVV ARLERGEDVD VDAEVHMVEP TPDELGELGK ALNLASRSAV
LTAVRQAEQH RGFQRMLQRI ARRTQILIGL QLKKLDELER KHEDPEVLEG LFDLDHLTAR
LRRYEENLVI LGGGQPQRRW RKPVRLLDVL RAAQGEVQDY RRISIDVEGE PWVTERAVGP
LIHVLAELME NATAFSKPLT PVEVRAAPVS RGLAVEIEDR GLGMEPEQYA AANALMQSPP
QLDVMTHADD VRLGLYVVAR LSAGLGLQVE LRPSAFGGTR VIVLLPEPLV VDRPRAVPGP
AAPPEEAPRD PTGPQLHPHE GTAGPRPPHE DAQLPTRSRG RAMAYVTAPT AGSPDQGDAP
PSSGQEPLPQ RVRQASLVTE LKVPADRDEQ TDQEDWAVRD QPSRSSATIG AFQRQSRRRR
TGDDTFQPRP DGSPEPGSPT TEDRR
|
|---|
| |