| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sros_3123 |
|---|
| Symbol | |
|---|
| ID | 8666411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Streptosporangium roseum DSM 43021 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013595 |
|---|
| Strand | - |
|---|
| Start bp | 3401561 |
|---|
| End bp | 3402160 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function ATP binding protein |
|---|
| Protein accession | YP_003338813 |
|---|
| Protein GI | 271964617 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.379671 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACG CAATCTCTGA CCACGGGGAC GCCGCTCCCC TGGCAGTGAA GATCCTTATC
GCCGGTGGTT TCGGCGTCGG GAAGACGACC CTGGTCGGCG CGGTGAGCGA AGTCGCCCCA
CTACGTACCG AGGAGTACCT GACCCATGCC AGCGTCGGCG TGGACGATCT GGAGGGGGTG
AGTGGCAAGT CCACCACCAC CGTCGCACTG GACTTCGGGC GCATCACCAT CAACAGTGAA
CTCGTGCTCT ACCTGTTCGG CACGCCCGGG CAGGAACGCT TCTGGTTCAT GTGGAACGAC
CTTGTCAACG GAGCGATGGG CGCGGTCGTC CTGGTCGACA CCCGCCGGCT GGATGTGAGC
TTCGCGTCGA TCGACTTCTT CGAGAGCCGA GGCATCCCCT TCGTCGTCGG CGTCAACTGC
TTCCATGGTG TCAGGGACCG GACACAGGAG GAGATCCGCA GGGCGCTCGA TCTCGATCCG
CAGGTGCCGC TGGTGCTCTG TGACGCCCGT GACCGGGCGG CGGGCCGCGA TGTGCTGCTG
GCGCTCATCG ACCACCTGAT GGCCGCTCAG TCCCGCACCG CACCGCACCC CGTGGCCTGA
|
|---|
| Protein sequence | MDYAISDHGD AAPLAVKILI AGGFGVGKTT LVGAVSEVAP LRTEEYLTHA SVGVDDLEGV
SGKSTTTVAL DFGRITINSE LVLYLFGTPG QERFWFMWND LVNGAMGAVV LVDTRRLDVS
FASIDFFESR GIPFVVGVNC FHGVRDRTQE EIRRALDLDP QVPLVLCDAR DRAAGRDVLL
ALIDHLMAAQ SRTAPHPVA
|
|---|
| |