Gene Sros_3116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_3116 
Symbol 
ID8666404 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp3396194 
End bp3397018 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content67% 
IMG OID 
Producttransposase IS4 family protein 
Protein accessionYP_003338806 
Protein GI271964610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCCTG CTTGTTACCC CTCGGACCTG ACCGACGCGC AGTGGGAGCT GATCGAACCC 
TTACTGCCCG AGCCAAACAC CGGCGGACGC CCGGAGAAGC ATCCGCGCAG GAAGATCGTC
AACGCGATCC TGTACGTGGT GCGCTCCGGC TGTCCATGGC GGTACCTGCC CATCGACCTG
CCGCCCTGGC AGACCGTGTA CTGGTACTTC CAGCGGTGGG AAGAAGCCGG CGTCACCGAG
ACGCTGCTGA CCGAATTGCG CAGGTCGGCC CGCCGGCAGG CCGGCCGCGC CGATGAGCCG
TCGGCGGGGA TCATCGACTC GCAAAGCGTC AAGGGCGCCG ACACAGTCGG CCGCGACAGC
CGCGGCTACG ACGCGAACAA GAAGGTCAAC GGCCGCAAGC GGTTCATCGT CACCGACACC
GGCGGCCTGC TGGTCACGGT CGCAGTGATG GCTGCAAGCC GGCAAGACCG TGACGGCGCC
AAGACCACCT TGCTGTCGAC GTACCTGACC ACCCCGATCC GGCGTGTCTT CGCCGACCAG
GGTTTTGCCG GACGGCTGGT GGGCTGGACT CATGACACGC TGCGTACCAC CCTGGAGATC
GTGCGCAAGC CCGCTGCCCA GCGTGGGTTC AACGTTATCT CGCGCAGGTG GGTGGTCGAG
CGGACATTGG CCTGGCTGAC CGCCTGCCGC CGTCTGGCTC GCGACTACGA ACGCGATCCC
GCAGTGTCCG CGGCGATCAT CCGCTGGGCC GCCATCGCCG GTATTGCCCG TCGCCTTACT
CGCGGCGGAC CCGCCCGACG CCAGGCTCGT TACATCTGCG ACTGA
 
Protein sequence
MSPACYPSDL TDAQWELIEP LLPEPNTGGR PEKHPRRKIV NAILYVVRSG CPWRYLPIDL 
PPWQTVYWYF QRWEEAGVTE TLLTELRRSA RRQAGRADEP SAGIIDSQSV KGADTVGRDS
RGYDANKKVN GRKRFIVTDT GGLLVTVAVM AASRQDRDGA KTTLLSTYLT TPIRRVFADQ
GFAGRLVGWT HDTLRTTLEI VRKPAAQRGF NVISRRWVVE RTLAWLTACR RLARDYERDP
AVSAAIIRWA AIAGIARRLT RGGPARRQAR YICD